Gene Shel_11170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11170 
Symbol 
ID8395008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1273745 
End bp1274311 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID644985875 
Producthypothetical protein 
Protein accessionYP_003143501 
Protein GI257063829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.358256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACG CACGTATGAG CTCGAGGTTT TGCCTGATTG CCGCGCTGTT GGCGTTCGCG 
TGCACGGCTG CGGCCCTGTC TGGGTGCACG AGGGCGGACG CGCCTTCCCC CGAGTCCGAA
TCTGCTGCGA CCGAAAGCGA TGACAGATTC GCTGCGAACG AAACGGGCGA CGACGAGGAG
TTCGAACTTG ACGGCGCCGG CTCCTATGTG GAGGTCGTCG ACTGGCAGAA GGTGGACCCC
TCCGAGTTCC CCGAGCTTCC CGACCCTTCC GCAGCAGGTG AGCGCGGGTT CCAATACGTG
ATCGACGAGA CTGGCGGGCA GGTGTTCCTT TTCGTGTGCT CGGGCGAGTG CCCTTCCAGC
GGATACGAGA TAGCGGTCGA CGATGTCCGG GCCATCGGGG CCGACTACAC CGTCGCCGTG
ACGGAGATCG AGCCGGCAGT AGGCGACGTC ACCGCCCAAA TGATCACGTA TCCCCAGGTC
TGCATTGTGT TTTCCTACGT GGAGCTTCCC GAGACCATCA GCGTGGTCAC TGCCGACCAC
GAGCACCTCG AGTGCACATA CCCCTAG
 
Protein sequence
MQHARMSSRF CLIAALLAFA CTAAALSGCT RADAPSPESE SAATESDDRF AANETGDDEE 
FELDGAGSYV EVVDWQKVDP SEFPELPDPS AAGERGFQYV IDETGGQVFL FVCSGECPSS
GYEIAVDDVR AIGADYTVAV TEIEPAVGDV TAQMITYPQV CIVFSYVELP ETISVVTADH
EHLECTYP