Gene Shel_11060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11060 
Symbol 
ID8394997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1262774 
End bp1263214 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content58% 
IMG OID644985864 
ProductProtein of unknown function (DUF1292) 
Protein accessionYP_003143490 
Protein GI257063818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00964819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATGCG GCAATACCTT CACCGTCACG AAGGACGACG GCCAGACCGT CGAATGCTCG 
GTCCTGTTCA CCTTCGAGAG TGCAGACTCA GGCAAGACCT ACGTGGTGTT CACAGACGAG
TCGCGCGACG AGATGGGCAA CACCATGGTG TATGCGAACA TCCTGGGCAA GCACAACAGT
CTGGAACCTA TCGAGACCGA TGAGGAATGG AACGTTGTGG AAGGCATCCT GAACCAGCTG
GAGCGTGAGG CACGAAACGG CAGTTTCGAC GGTTTGGACG AAGACGAAGT CGCCCGCCTT
TTGGAAGACC GCATCAACGT CGCACCCGAG CCCGAGCTCG ACCCCGAGCC TTACACCCTG
GAAGACCTGA ACAGGGATGT GGACGCCCTG AACGCCTTCA TGCGCCAGCT TGAAGCCGAG
ATGGGCGAAG GCGGGGTATA A
 
Protein sequence
MECGNTFTVT KDDGQTVECS VLFTFESADS GKTYVVFTDE SRDEMGNTMV YANILGKHNS 
LEPIETDEEW NVVEGILNQL EREARNGSFD GLDEDEVARL LEDRINVAPE PELDPEPYTL
EDLNRDVDAL NAFMRQLEAE MGEGGV