Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_11000 |
Symbol | |
ID | 8394991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1254423 |
End bp | 1255163 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985858 |
Product | tRNA (Guanine37-N(1)-) methyltransferase |
Protein accession | YP_003143484 |
Protein GI | 257063812 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00214404 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000164324 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTCATCG AAACGCTGTC CACCTTCCCG CACATGTACG ACTCGGTGGT CAACGAGTCC ATCCTCAAGC GGGCCCAGGC CGCCGGAGCC TTCGAGTTTC GCGCCCATGA CCTGAGGGAT TGGACGCACG ACCGCCACCG CACCACCGAC GACGACCCCT ACGGCGGAGG CCAGGGCCTG CTCATGAAGT GCGGACCCAT CTTCGAGGCC TACGACGACA TCGCCGCAGA AGGTCCCAAG CCCTTCACCA TTTTCCTTAC GCCCACAGGC GTTCCTTTCG ATCAGGGCGT GGCGGCCCAG CTCGCCATGC AGGAGAGGTT GCTGTTCATC TGCGGCCACT ACGAAGGTAT CGACGAGCGC GCCTATACGC TGTCGGACAT GAACATCTCG CTGGGGGATT ACGTCCTCAC CTCGGGCGAA CTTGCATCCA TGGTGGTCAT CGACGCCGTG GTGCGTCTGC TCGACGGCGT GCTCGGCGAC GAAGCCAGCG CGGTGGACGA GAGCTTCTAC GACGGTTTGC TGGAATACCC CCAATACACG CGCCCGGCGG AATTCCGCGG CATGCGCGTG CCGGACGTGC TGCTCTCGGG CGACCACGGC AAGGTGGACG CCTGGCGCAG GCGGCAATCG CTTGAGCGAA CCGCGCGTTT ACGTCCCGAT TTGTTGGAGA GGGCGAATAT CACCGACGAT GAGCGAGCTT TTTTGCTATC ATTGCAAAGC GACTTTTCTG AAGGCGTTTA A
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Protein sequence | MLIETLSTFP HMYDSVVNES ILKRAQAAGA FEFRAHDLRD WTHDRHRTTD DDPYGGGQGL LMKCGPIFEA YDDIAAEGPK PFTIFLTPTG VPFDQGVAAQ LAMQERLLFI CGHYEGIDER AYTLSDMNIS LGDYVLTSGE LASMVVIDAV VRLLDGVLGD EASAVDESFY DGLLEYPQYT RPAEFRGMRV PDVLLSGDHG KVDAWRRRQS LERTARLRPD LLERANITDD ERAFLLSLQS DFSEGV
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