| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10880 |
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| Symbol | |
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| ID | 8394979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1242193 |
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| End bp | 1245051 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985846 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_003143472 |
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| Protein GI | 257063800 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.400648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000689376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGGAAACG ATTACAAGCA CACAATGAAC CTGCCGAAGA CTGACTTCTC CATGAAGGCG
AACTTGCCGG AGAACGAGCC GAAGCGCCTG AAGAAGTGGT CTGAACAGGA CATTTACCAT
AAGGTCCTGG AGAAGAACAA GGACGGCGAG CCCTTCATCC TGCATGACGG CCCTCCGTAC
GCCAACGGCC CGATCCACAT CGGCCACGCC TTCAACAAGA TTCTGAAGGA CTTCGTCGTG
AAGTCCCATG CCCAGCGCGG CTATTTCACC CCGTACATCC CCGGTTGGGA CTGCCACGGC
CAGCCCATCG AGCATGAGGT GGAAAAGAAG CTCGGCACCG AGAAGATGAA CCAGCTGCCT
CAGGCCACCA TCCGCCGCCT CTGCCACGAA TGGGCCGAGA AGTTCGTCGA CGTGCAGCGC
GACGGCTTCA TGCGCCTGGG TGTCAACGCC GACTGGTTCA ATCCGTACCT CACCTTCATG
CCCACTTTCG AGTCGGCCAA CGTCGAGGTG TTCAAGAAGC TGTACCTGGA CGGCGCCGTG
TACCGCGGCC GCAAGCCCAT CCACTGGTGC AGCCATTGCC ATACCGCACT TGCCGAAGCC
GAAATCGAAT ACGGCGACGA GGTAAGCCCC GCCATCTTCG TGACCTTCGA GCTCACCACC
GTGCCTGAAG GCCTCGAAGG TTGGGAAGGC AAGGTGGACG TGGCCATCTG GACCACCACG
CCTTGGACCC TGCCTGCCGA CGACGCGGTC ATCCTGCATC CCGATGCCGA GTATGTGGCC
GTCGAGCGCA ACGGCCGCGC GGTCATCTTC GCACGCGCCC TCGCCGAGAA GTGCTGCGCC
AAGTTCGGCT GGGACTTCGT GCTGGTCAAC GGCGACAACG GCGAGCTGTG GGCCCGCACC
GGCACCCAGC TGGCCTATAA CCGCTACAAG CAGCCCATCT TCGGCGACCA GGGCGAAGAG
GGCCTGTTCA TCTACGCCGA CTACGTCACG CTGGACGACG GCACGGGCAT CGTGCACTCC
GCTCCCGGTC ACGGCGTCGA CGACTACAAG GCCGGCATGA AGTTCGACGT GCCCGTCATC
ATGCCCGTCG ACGACAACGG CTGCTTCTAC GTGGGCGACA CCATCGGATT CGGCGGACCC
TTCAGCGGCA TGGAGGTCAA CGAAGCCAAC CCGAAGATCA TCGAGTGGCT CGACGAGCGC
GGCATGCTCA TCCTGCACGA GGACATCAAC CACAGCTATC CGCACTGCTG GCGCTGCCAC
CGTCCGGTCA TCTTCCGCGC CACCAACCAG TGGTTCGTGT CCATGGACGA GACCGGCCTG
CGCGAGAAGG CCCTGGACCA GATTTACAAC CATGTGGACT TCTACCCCGA GTGGGGCGTG
AACCGCATCG GCGCCATGGT CACCGACCGG CCTGACTGGT GCATCTCCCG CCAGCGCAGC
TGGGGCGTGC CCATTCCCGT GTTCAAGTGC GGCGATTGTG GCGAGACCAT CGCCGACGAG
GCCACCTTCG ACGCGGTCAT CGACCTGTTC AACAACGAGG GTGCGGACGC CTGGTTCACT
AAGGAACCCG TGGAGTACCT GCCCGAGACC ACCTGCTGCC CGAAGTGCGG CAGCCGCAAC
ATCCAGCCTG AGAAGGACAT TCTGGACGTG TGGTGGGAAT CCGGCGTCTC CCATGTGGGC
GTGCTGCAGC ATCGCGCCGA GGCCGACCAC CTGCGTTGGC CTGCGGATAT GTATCTCGAA
GGTTCCGACC AGCATCGCGG CTGGTTCCAG AGCTCGCTGC TTCTGGGCAC CGGTGCCTTC
GGCCAGTCCC CGTACAAATC CGTCGTGTGC TGCGGCTTCA CCGTGGACGA GAACGGTGAG
AAGATGTCCA AGTCCAAGGG CAACGGCATC GATCCCAAGC AGGTAGCCGA CGCTTACGGC
GCCGACGTTC TGCGCTTGTG GGTCGCATCC ACCGACTACT CCGTGGACGT GTCCATCGGC
GACACCATCC TGAAGCGTAC CTCCGACGCA TACCGTCGCT TCCGCAACTC CTTCCGCTTC
CTGCTGGGCA ACCTGAGCGA CTTCGACGAC ATGCGCGACG CGGTGGCCCT GGAAGACATG
AAGCCCATCG ACGTGTGGGC CATGCTTCGT TTGGCCGAAG TCCTCGCCGA GGTGGAGCGC
GGCTACGACG AGTACCGCTT CCATCAGGTG TTCCGCGTTC TGTACGACTA CGTCATCACC
GACCTGTCCG CCATTTACAT GGATGTGGCG AAGGACCGTC TGTACTCCGA GGCTCCGGGC
TCTCTTGCCC GCCGAAGCGC CCAGACGGTG CTCATGAACA TCCTCGAGGT GCTGGTTCGC
GTCATGAGCC CCATCCTGTC GTTCACATGC GACGAGGTGT GGGAGCACTA TCCCGAGGCC
GCCCGCAACC GCGAAGGCCG TCCTATCAGC GTGCAGCTGG CCGGTTGGCC CACCGTCGAC
GACTTCGTGC CCGCCATTCC TCAGGGTGAG GAGGCGGAAG CCTTCATGGC CCGCTTCAAC
ACGTTGCTGG AGGTGCGCGA CGTGGTCACC AAGGCCCTGG AGGACGCCCG CAACGCAGGC
GATCTGAACA AGAGCCAGGA GGCCGTGCTG ACCATCACCG CGCCCGAGGA TGTGATCGAG
GTCCTGAACA GCTTCTCCTC CGCCGACCTG GAAGAGCTCT TCATCGTGTC CGACGTCATC
GTGATGGAGC CTGCGGATGA GGAATTGACC GCCGCCGTAG CCAAGACCGA CAAGGAGAAG
TGCCCGCGCT GCTGGAACCA TCGCAAGCTG GGCGGCAATC CCAACCATCC GGACGTCTGC
GCTCGTTGCG GCGACGTGCT TGACGCGCTC GGCGAGTAG
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| Protein sequence | MGNDYKHTMN LPKTDFSMKA NLPENEPKRL KKWSEQDIYH KVLEKNKDGE PFILHDGPPY
ANGPIHIGHA FNKILKDFVV KSHAQRGYFT PYIPGWDCHG QPIEHEVEKK LGTEKMNQLP
QATIRRLCHE WAEKFVDVQR DGFMRLGVNA DWFNPYLTFM PTFESANVEV FKKLYLDGAV
YRGRKPIHWC SHCHTALAEA EIEYGDEVSP AIFVTFELTT VPEGLEGWEG KVDVAIWTTT
PWTLPADDAV ILHPDAEYVA VERNGRAVIF ARALAEKCCA KFGWDFVLVN GDNGELWART
GTQLAYNRYK QPIFGDQGEE GLFIYADYVT LDDGTGIVHS APGHGVDDYK AGMKFDVPVI
MPVDDNGCFY VGDTIGFGGP FSGMEVNEAN PKIIEWLDER GMLILHEDIN HSYPHCWRCH
RPVIFRATNQ WFVSMDETGL REKALDQIYN HVDFYPEWGV NRIGAMVTDR PDWCISRQRS
WGVPIPVFKC GDCGETIADE ATFDAVIDLF NNEGADAWFT KEPVEYLPET TCCPKCGSRN
IQPEKDILDV WWESGVSHVG VLQHRAEADH LRWPADMYLE GSDQHRGWFQ SSLLLGTGAF
GQSPYKSVVC CGFTVDENGE KMSKSKGNGI DPKQVADAYG ADVLRLWVAS TDYSVDVSIG
DTILKRTSDA YRRFRNSFRF LLGNLSDFDD MRDAVALEDM KPIDVWAMLR LAEVLAEVER
GYDEYRFHQV FRVLYDYVIT DLSAIYMDVA KDRLYSEAPG SLARRSAQTV LMNILEVLVR
VMSPILSFTC DEVWEHYPEA ARNREGRPIS VQLAGWPTVD DFVPAIPQGE EAEAFMARFN
TLLEVRDVVT KALEDARNAG DLNKSQEAVL TITAPEDVIE VLNSFSSADL EELFIVSDVI
VMEPADEELT AAVAKTDKEK CPRCWNHRKL GGNPNHPDVC ARCGDVLDAL GE
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