| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10840 |
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| Symbol | |
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| ID | 8394975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1237868 |
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| End bp | 1238743 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985842 |
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| Product | degV family protein |
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| Protein accession | YP_003143468 |
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| Protein GI | 257063796 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00470044 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000186001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCTTACA CCATTGTTAC CGATTCCAGC TGCAACCTGA CGGAAGCAAC CATCGACGAG
TGCGAGCTGG AAATCCTGCC GCTGATCTTC TTTGTGGACG GCGAACAGTA TCAAAGCTAT
CTCAAGGGCG AGAAAACCGA CCTGAAGCAG TTCTACACCA TGATGCGCGA CGGCAAGGTG
GTCACCACCT CGCTCCCCAT TCTGACGGAA TCCGAAAAAG TGTTCCGTGG CATTTTAGAT
GCAGGAAACG ACGTGCTGTA CCTGGGTTTC TCCAGCGGAC TGTCGGGCAC GTACGAAGCC
ACCGATCTGC TGCTGAAAGA GCTGTCGAAA AGCTACCCCG ACCGCACGAT CCTTTCCGTG
GACACGCTTG CCGCGTCCGG CGGCCAAGGA CTTCTGGTGT GGTACGCCGC CCAAAAGAAG
AAGGAAGGCG CCACCATCGA AGAGGTGCGC GACTGGGTCG AGGTCAACAA GTCCAAGCTG
GCCCACTGGT TCACTGTCGA CGACCTCATG TTCCTGTTCC GCGGCGGACG TGTAAGCCGT
TCGAGCGCCT GGGCAGGCAC GTTGCTCAAC ATCAAGCCGG TCCTGCATGT GGATGACGAG
GGACACCTTA TCCCCATGGA GAAGGTGCGC GGCCGCAAGA AATCCATCCA GGGACTGCTC
AACCACATGA AGCAGACCGC CGACGAGCCC GTCAGCGAGC AGACCGTGTT CATCACCCAT
GGCGACTGCC TGGAGGATGC CGAGTATCTG GCCGACCTCA TCCGTAAGGA ATTCGGCACC
AAGGACATCC GCATCAACTA CGTGGACCCC GTGATCGGCG CCCATTCCGG CCCGGGCACA
TTGGCGTTGT TCTTCCTGGC ATCCAGCAAG AACTAG
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| Protein sequence | MPYTIVTDSS CNLTEATIDE CELEILPLIF FVDGEQYQSY LKGEKTDLKQ FYTMMRDGKV
VTTSLPILTE SEKVFRGILD AGNDVLYLGF SSGLSGTYEA TDLLLKELSK SYPDRTILSV
DTLAASGGQG LLVWYAAQKK KEGATIEEVR DWVEVNKSKL AHWFTVDDLM FLFRGGRVSR
SSAWAGTLLN IKPVLHVDDE GHLIPMEKVR GRKKSIQGLL NHMKQTADEP VSEQTVFITH
GDCLEDAEYL ADLIRKEFGT KDIRINYVDP VIGAHSGPGT LALFFLASSK N
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