| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10800 |
|---|
| Symbol | |
|---|
| ID | 8394971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1235322 |
|---|
| End bp | 1236014 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644985838 |
|---|
| Product | SOS regulatory protein LexA |
|---|
| Protein accession | YP_003143464 |
|---|
| Protein GI | 257063792 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000176447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000017839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTC GTAAAAAAGA CTCCACCAAG CTCACCAAGA AGCAGACGGC TGTGCTCGAT
TGCATCATCG CCACCATCGA AGAAACCGGC ATCGCCCCCA CCGTTCGCGA CATCTGCGAC
AGCATCGGGC TTTCGTCCCC CTCCACCGTG CATGTGCACC TGAACAATCT TGAGGAGAAG
GGCTATATCC ATCGCGACCC CCTGAAGTCG CGCTGCATCA CCGTGCTGCG TACCTCCGAC
GGCGAAACCT ATGGAGGCAC CGCACCAAAG GGCCAACCAG CCCACAACGA TTTCGTCGGT
CAGGGTGAAT TCTCCAACGT GGTCAACCTG CCGGTCGTCG GCAACGTCGC TGCTGGCGTG
CCCATTCTTG CCGAGCAGAA CATCCAGGAG ACCATCCCCC TGCCCACCGA AATCGTCGGC
GATTCCAGTT CGTTTTTGCT GAAGGTACGC GGTGACTCCA TGATCGAAAT CGGCATCAAC
GACGGCGACT TCGTCGTGGT GAAGGAACAG CCGAATGCCA ACAACGGCGA TATCGTCGTG
GCCCTCGTCG AAGACGGCGC AACGGTCAAG CGCTTCTTCA AAGAGCGCGA TCACATCCGC
CTGCAGCCAG AAAACTCCAC CATGGAACCT ATCATCGTTC GCGAGAACGT CTCCATTGCA
GGAAAGGTCG TTGCCGTGTT CCGCCGTCTG TAA
|
|---|
| Protein sequence | MTVRKKDSTK LTKKQTAVLD CIIATIEETG IAPTVRDICD SIGLSSPSTV HVHLNNLEEK
GYIHRDPLKS RCITVLRTSD GETYGGTAPK GQPAHNDFVG QGEFSNVVNL PVVGNVAAGV
PILAEQNIQE TIPLPTEIVG DSSSFLLKVR GDSMIEIGIN DGDFVVVKEQ PNANNGDIVV
ALVEDGATVK RFFKERDHIR LQPENSTMEP IIVRENVSIA GKVVAVFRRL
|
|---|
| |