| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10700 |
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| Symbol | |
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| ID | 8394961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1223971 |
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| End bp | 1225311 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985828 |
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| Product | MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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| Protein accession | YP_003143454 |
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| Protein GI | 257063782 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00016615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000172933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGTCGAATA TCGATGTAAC GTCCGTCCTG CTGAACGAGC AGGACGGACG TATTCCGTCT
GTTAACTTCA TCACCCTGGG CTGCGCCAAG AACGAAGTGG ACTCGGCCGA CATGCAGCGC
CGACTGGTGT CGGCGGGTTT CGCGATCGTC GACGACGCCG AAGACGCCGA CGCCGTCATC
GTGAACACCT GCTCGTTCAT CCAAGCCGCC ATCGAGGAGA GCATCGACGT CATCTTGGAG
GTGGCCGGGC TCGCCAACAT CGCCGACGGC TCGTCCAAGC TCATCGTCGC AGGCTGCATG
CCCGCCCGTT TCGGGGACGA TCTGGAATCC GAGCTGAACG AGGCCAGTGC TTTCGTTCCC
TGCAGCAAGG AGGACGACAT CGTCGAGGTC GTCCAGCGTA CACTGGGCGT GAATCCCGCA
CCCTTCGCCC GCGTGGACGT GGAAAGCGGC CCTGCGGCGG CCTATGTCAA GATCAGCGAC
GGCTGCAACC GCTTCTGCTC GTTCTGTTCC ATTCCCTATA TCCGCGGACG TTACCACAGC
TTCCCTTACG AGCGCATCCG CGCCTCGGTG GAGCAGTGCA TCGCCGAAGG CTCCGTGGAA
ATCACCCTCA TCGGCCAGGA TACGGGCTGC TGGGGCTCGG ATTTCGAGGA GAAGTCCACC
ACGGCGCAGC TTCTGTCGAA CCTGGCCGAA GAGTTCCCGG ATACGTGGTT CCGTATCATG
TACGTCGAGC CCGACGGCAT AACCGACGAG CTGCTGGACG CCATCGCCGC GCATGACAAC
GTCTGCGACT ACCTGGACAT GCCGCTGCAG CATGCCAATC CCGAGCTGCT GAAATCCATG
CGCCGCAAGG GCAGCGCCCC TGAGTTCCTG AAGCTTCTGG AACGCATTCG AACCCGCGTG
CCGGGCATCA CGCTGCGCAC CACGCTCATC ACGGGCTTCC CAGGCGAAAC CGAGGAGGCC
TTCGACGAGC TCATGGAGTT TCTGGAGGAG GCCGACTTCG ATTACGTGGG CGTGTTCCCG
TATTCGAGGG AGGAAGGCAC CCGCGCCTAC GACCTTCCCG ACCAGGTAGA AGAGGAGCTG
AAGGTGGCCC GGGCCCAGGA GGTCCGCGAC CTGTGCGACG CGGTGGGGTC GGTTCATACC
GCCGATCGCA TCGGGAAAGA GCTGGACGTG CTGGTGTTGG GTGCCGAAGA GGACGGCCAG
CTGTTCGGAC GCGCCATGTG CCAGGCGCCT GATGTTGATG GCGTGGTATA CGTCGACGGA
GGCGAAGTGG GCGAAATTGT CCGCGTTACA ATTGTGGACA CGCTTGCATA CGATATGGAA
GGCGAAATCA TTCATGGCTG A
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| Protein sequence | MSNIDVTSVL LNEQDGRIPS VNFITLGCAK NEVDSADMQR RLVSAGFAIV DDAEDADAVI
VNTCSFIQAA IEESIDVILE VAGLANIADG SSKLIVAGCM PARFGDDLES ELNEASAFVP
CSKEDDIVEV VQRTLGVNPA PFARVDVESG PAAAYVKISD GCNRFCSFCS IPYIRGRYHS
FPYERIRASV EQCIAEGSVE ITLIGQDTGC WGSDFEEKST TAQLLSNLAE EFPDTWFRIM
YVEPDGITDE LLDAIAAHDN VCDYLDMPLQ HANPELLKSM RRKGSAPEFL KLLERIRTRV
PGITLRTTLI TGFPGETEEA FDELMEFLEE ADFDYVGVFP YSREEGTRAY DLPDQVEEEL
KVARAQEVRD LCDAVGSVHT ADRIGKELDV LVLGAEEDGQ LFGRAMCQAP DVDGVVYVDG
GEVGEIVRVT IVDTLAYDME GEIIHG
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