Gene Shel_10640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10640 
Symbol 
ID8394955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1214512 
End bp1215435 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content63% 
IMG OID644985822 
Producthypothetical protein 
Protein accessionYP_003143448 
Protein GI257063776 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00647] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0387663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000259024 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTTCA CCAACGATGT AAAAGACGAG CTGACACGCG TCATTCCGTC CTGCCGCCAT 
TGCGACCGGT CGGTGCTGGC TGCGCTGGTG CGCATCGAGG GCACGCTGAC GTTTTCGGGG
CCGGGCAAGT ACAAGCTCGA GATTTCCACG GAGCTTGGCT CGGTGGCCCG GTTGGTCATC
CGGTCGCTGC ACGGCATCTA CCAGCTGGCG ACCGAGCTCA CCGTGCGCCG CAGCGTTCTG
CATAAGACGC CGAACTACCT GATCACCGTG CCGAACCAGC CCAAGCTGGA ACAGGCCCTC
CACGACCTGG GCGTGCTTGG CCCCCAGGGT CTGCAGATGG GCATCGACGA GCATTTGGTG
AAGAAGAACT GCTGCGCCGC CGGTTATGTG CGCGGGGCGT TTCTGGGCAG CGGGTTCATA
GCCGACCCTC GCGGCGACTT CCATTTCGAA ATCACCGTGG AGAACGCCGA GCTGGCCCGC
GACCTGGCCG CCGTCATGAA CGACCACGAC ATGAACGCGC ATGTGCTGCA GCGCCGCAAC
TCCTATATCG TCTATATGAA AAGCGGCGAG TCGGTATCCG CGTTCCTCGC GTTCACGGGC
GCCCACCAGT GCGCGTTGAC CATGGAGAGC GAACGTGTGC GCAAAAGCGT ACGCAACGAC
GTCAACCGCA AACTCAACGC CGAGCTGGCG AACCAGGCCA AGACCGCAAA CGCTGCGGTG
GACCAGATCG TCAGCATCCG CAAGATCGTC GAAAGCGGCA AGGTGAACAC GCTGTCGCCG
GGGCTGCAGG AGTTCGTCTA CCTGCGCCTT CACAACCCTG AGCTATCCTT GAAAGAGCTG
GGGGAGAAGG CGGACCCGCC CCTGTCGAAA TCGGCGGTCT ACCACCGCGT CCGCCGTCTT
GAGGAGATCG CCAGCAAGCT GTAG
 
Protein sequence
MSFTNDVKDE LTRVIPSCRH CDRSVLAALV RIEGTLTFSG PGKYKLEIST ELGSVARLVI 
RSLHGIYQLA TELTVRRSVL HKTPNYLITV PNQPKLEQAL HDLGVLGPQG LQMGIDEHLV
KKNCCAAGYV RGAFLGSGFI ADPRGDFHFE ITVENAELAR DLAAVMNDHD MNAHVLQRRN
SYIVYMKSGE SVSAFLAFTG AHQCALTMES ERVRKSVRND VNRKLNAELA NQAKTANAAV
DQIVSIRKIV ESGKVNTLSP GLQEFVYLRL HNPELSLKEL GEKADPPLSK SAVYHRVRRL
EEIASKL