Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10570 |
Symbol | |
ID | 8394948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1203154 |
End bp | 1204404 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985815 |
Product | Na+/serine symporter |
Protein accession | YP_003143441 |
Protein GI | 257063769 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3633] Na+/serine symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000939446 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000018632 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGAAC TATGGTCCAA ATGGATCGGC ACGAGTCTGA TCGTGCGTAT CCTCATCTTC ATGGTCGTGG GCCTTATCCT GGCCCTGATC ATCCCCGATG TGCCTGTGGT CACGCCGGTC CTCGTTCTGC TGGGCAACCT GTTCGTCGGC GCTTTGAAGG CCGTCGCGCC CATCCTGGTC TTCTTCCTCG TCATCGGCGC CCTGGCCAAC GCCAAGACCG CAGGCGGCAT GAAGACCGTC ATCGTCCTGT ACCTGGTCAG CACGTTCGTG GCCTCCCTGG TCGCCGTGCT CGCCAGCTAC CTGTTCCCCA CCAGCCTCAC CCTGCAGGGT GCTGAAGGCG TCGAACAGAC CGCGGCCTCC GGCATCGGCG AGGTTCTGAC CACCCTGGTC ACCAACATGG TCGCCAACCC GGTCAGCTCC CTGGTCAACG CCAACTACAT CGGCATCCTC GTGTGGGCCG TCATCATCGG CATCGCCCTG CGCGCCGCTT CTGAAAACAC CCGCAGCGTC TTCGGGGACA TCGCCACCGC CATCACCACC GTGGTCAAGT GGATCATCAA CTTCGCGCCC TTCGGCATCC TCGGCCTGGT CTACAACGCC GTCGCCACTT CGGGCCCCGA AATCTTCACC GAGTACGGAC ACCTGGTCGC GGTGCTGGTC CTGTGCATGA TCTTCATCGC GCTGGTCACC AACCCGCTGA TCGTGTTCAT CGCCGCCCGC ATCAACCCCT ATCCGCTGGT GCTGCGCGCT CTGCGCGACT CCGGCATCAC GGCGTTCTTC ACCCGTAGCT CCGCTGCGAA CATCCCGGTC AACCTGGAGC TGTGCCGCAA GATGCATCTG GATGAGAACA ACTACTCCGT GTCCATCCCG CTGGGCGCCA CCATCAACAT GGCAGGCGCT GCCGTCACCA TTACCGTGAT GGCCATGGCA GCCCACTACA CCGTTACTGG CACCCTGCCC GACATCCCTA CCGCGGTCAT CATGTCCGCC CTGGCAGCCA TCTCGGCAGC CGGCGCCTCG GGCGTTCCCG GCGGTTCGCT GATGCTCATC CCGCTGGCTT GCTCGCTGTT CGGCATCGGC AACGACATCG CCATGCAAGT CGTCGCCGTC GGCTTCATCG TCGGCGTTAT CCAGGACTCC TGCGAGACCG CACTGAACTC CTCCTCCGAC GTGGTGTTCA CGGCAACCGC CGAATACCGC ACCTGGAAGC AGGAAGGCCG CAAGGTCGAC TTCAGCGCTT GGGAGAAGTA G
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Protein sequence | MKELWSKWIG TSLIVRILIF MVVGLILALI IPDVPVVTPV LVLLGNLFVG ALKAVAPILV FFLVIGALAN AKTAGGMKTV IVLYLVSTFV ASLVAVLASY LFPTSLTLQG AEGVEQTAAS GIGEVLTTLV TNMVANPVSS LVNANYIGIL VWAVIIGIAL RAASENTRSV FGDIATAITT VVKWIINFAP FGILGLVYNA VATSGPEIFT EYGHLVAVLV LCMIFIALVT NPLIVFIAAR INPYPLVLRA LRDSGITAFF TRSSAANIPV NLELCRKMHL DENNYSVSIP LGATINMAGA AVTITVMAMA AHYTVTGTLP DIPTAVIMSA LAAISAAGAS GVPGGSLMLI PLACSLFGIG NDIAMQVVAV GFIVGVIQDS CETALNSSSD VVFTATAEYR TWKQEGRKVD FSAWEK
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