Gene Shel_10570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10570 
Symbol 
ID8394948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1203154 
End bp1204404 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content63% 
IMG OID644985815 
ProductNa+/serine symporter 
Protein accessionYP_003143441 
Protein GI257063769 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000939446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000018632 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAAC TATGGTCCAA ATGGATCGGC ACGAGTCTGA TCGTGCGTAT CCTCATCTTC 
ATGGTCGTGG GCCTTATCCT GGCCCTGATC ATCCCCGATG TGCCTGTGGT CACGCCGGTC
CTCGTTCTGC TGGGCAACCT GTTCGTCGGC GCTTTGAAGG CCGTCGCGCC CATCCTGGTC
TTCTTCCTCG TCATCGGCGC CCTGGCCAAC GCCAAGACCG CAGGCGGCAT GAAGACCGTC
ATCGTCCTGT ACCTGGTCAG CACGTTCGTG GCCTCCCTGG TCGCCGTGCT CGCCAGCTAC
CTGTTCCCCA CCAGCCTCAC CCTGCAGGGT GCTGAAGGCG TCGAACAGAC CGCGGCCTCC
GGCATCGGCG AGGTTCTGAC CACCCTGGTC ACCAACATGG TCGCCAACCC GGTCAGCTCC
CTGGTCAACG CCAACTACAT CGGCATCCTC GTGTGGGCCG TCATCATCGG CATCGCCCTG
CGCGCCGCTT CTGAAAACAC CCGCAGCGTC TTCGGGGACA TCGCCACCGC CATCACCACC
GTGGTCAAGT GGATCATCAA CTTCGCGCCC TTCGGCATCC TCGGCCTGGT CTACAACGCC
GTCGCCACTT CGGGCCCCGA AATCTTCACC GAGTACGGAC ACCTGGTCGC GGTGCTGGTC
CTGTGCATGA TCTTCATCGC GCTGGTCACC AACCCGCTGA TCGTGTTCAT CGCCGCCCGC
ATCAACCCCT ATCCGCTGGT GCTGCGCGCT CTGCGCGACT CCGGCATCAC GGCGTTCTTC
ACCCGTAGCT CCGCTGCGAA CATCCCGGTC AACCTGGAGC TGTGCCGCAA GATGCATCTG
GATGAGAACA ACTACTCCGT GTCCATCCCG CTGGGCGCCA CCATCAACAT GGCAGGCGCT
GCCGTCACCA TTACCGTGAT GGCCATGGCA GCCCACTACA CCGTTACTGG CACCCTGCCC
GACATCCCTA CCGCGGTCAT CATGTCCGCC CTGGCAGCCA TCTCGGCAGC CGGCGCCTCG
GGCGTTCCCG GCGGTTCGCT GATGCTCATC CCGCTGGCTT GCTCGCTGTT CGGCATCGGC
AACGACATCG CCATGCAAGT CGTCGCCGTC GGCTTCATCG TCGGCGTTAT CCAGGACTCC
TGCGAGACCG CACTGAACTC CTCCTCCGAC GTGGTGTTCA CGGCAACCGC CGAATACCGC
ACCTGGAAGC AGGAAGGCCG CAAGGTCGAC TTCAGCGCTT GGGAGAAGTA G
 
Protein sequence
MKELWSKWIG TSLIVRILIF MVVGLILALI IPDVPVVTPV LVLLGNLFVG ALKAVAPILV 
FFLVIGALAN AKTAGGMKTV IVLYLVSTFV ASLVAVLASY LFPTSLTLQG AEGVEQTAAS
GIGEVLTTLV TNMVANPVSS LVNANYIGIL VWAVIIGIAL RAASENTRSV FGDIATAITT
VVKWIINFAP FGILGLVYNA VATSGPEIFT EYGHLVAVLV LCMIFIALVT NPLIVFIAAR
INPYPLVLRA LRDSGITAFF TRSSAANIPV NLELCRKMHL DENNYSVSIP LGATINMAGA
AVTITVMAMA AHYTVTGTLP DIPTAVIMSA LAAISAAGAS GVPGGSLMLI PLACSLFGIG
NDIAMQVVAV GFIVGVIQDS CETALNSSSD VVFTATAEYR TWKQEGRKVD FSAWEK