Gene Shel_10500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10500 
Symbol 
ID8394941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1196346 
End bp1196900 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content63% 
IMG OID644985808 
Producthypothetical protein 
Protein accessionYP_003143434 
Protein GI257063762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000197514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGGGC TGCAGAAAGC AAACGCCATC GCGACGTCGA GCATAGCTGC CGACGAGAAA 
AGGGGGATGA CAATGGGATT CTTTGAAGAC TTGAGCGCAA CCGTCAACCG CGGACTGGAC
GATGCCAGCC GCATGGCCGA CAATGCCGGC GCGAAATTCA AGCTGGCAGA GGCAAAGCGC
CGTCGCCGCG AAGCCATGGC CGACTACGGC GAGAGCATGT TCGAGGCCTA CTCGCAGGAG
CCGACGTTCG CGCAGGGTAG GGAAGAGCTC ATCGCGGCCG TTGCCAAGAT CGATGAGGAA
ATCGCCGCCA TTCAGGCGAA GATCGACGAG AACGAACGCC GCACTGCCGA GAAGAAAACG
GTGCTCAGCT GCCCGACCTG CGGTGCCACG TTGGCCGAAG GTGTCAACTT CTGCTCGAAC
TGCGGAACCG CCATCGCCTA CGAGCCGCCG GCGGAGCCCG CGCAGCCTGT GGAGCCCCAG
CAGCCCGCCC AGCCCCAGCA GCCTGCGGCA ACCGTTGATT TCGAGGTTGT GGACAATCCC
GAAACGCAGG CATAG
 
Protein sequence
MMGLQKANAI ATSSIAADEK RGMTMGFFED LSATVNRGLD DASRMADNAG AKFKLAEAKR 
RRREAMADYG ESMFEAYSQE PTFAQGREEL IAAVAKIDEE IAAIQAKIDE NERRTAEKKT
VLSCPTCGAT LAEGVNFCSN CGTAIAYEPP AEPAQPVEPQ QPAQPQQPAA TVDFEVVDNP
ETQA