Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10460 |
Symbol | |
ID | 8394937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1192142 |
End bp | 1192624 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644985804 |
Product | sortase-like acyltransferase |
Protein accession | YP_003143430 |
Protein GI | 257063758 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.81082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000159699 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAGG TTCGGGCTTA TACGCAAGAA GATGTGGCCG GGATGGTCGA AGTGTGGAAC GAAGTCGTGG ATGCAGGCAT TTCGTTTCCT CAGGAAAAAG GCCTGACGGT AGAAGAAGGG GCCGCTTTCT TCGGCGAGCA GACGCATTGC GCCGTTGCCG TGGAAGACGG GGTTGTTCTC GGGCTCTACA TTCTGCATCC CAACAACGTC GGACGCTGCG GTCATATCGC CAATTCAAGC TATGCTGTAC GTGCGAATCG GCGTGGAAAA GGCATCGGGC GAATGCTCGT GTCTGACTCT TTGAGGATGG GGCGCGAATG CGGATTCCGT ATTTTGCAGT TCAACGCCGT GGTAGCCACG AATGCGGGCG CCCGTCATCT GTATGAGAGT CTGGGCTTCA AGCAACTGGG CACGATTCCG GGAGGCTTCC ACATGCCGGA CGGTAGCTAC GAGGACATCT GCCCGTACTA TCACGAGTTG TAA
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Protein sequence | MIEVRAYTQE DVAGMVEVWN EVVDAGISFP QEKGLTVEEG AAFFGEQTHC AVAVEDGVVL GLYILHPNNV GRCGHIANSS YAVRANRRGK GIGRMLVSDS LRMGRECGFR ILQFNAVVAT NAGARHLYES LGFKQLGTIP GGFHMPDGSY EDICPYYHEL
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