| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10300 |
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| Symbol | |
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| ID | 8394921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1174420 |
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| End bp | 1175538 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985788 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_003143414 |
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| Protein GI | 257063742 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0541623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000192008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCGTACG ATCCTTACAA GGCGCTCTAC ATACATCTGC CGTTCTGCAA GCATCGCTGT
GCGTACTGCG ATTTCACCAC GCGGGCTATC CCAAAGGATT CACCGGAGAT CGGCGAGTAT
ATCGAGAACC TGGTGCTGGA CATCCGCCAT GCCTCCCGCG AGGGCTTCCT TTCGCAGATC
GAAACCGTCT ACATCGGCGG CGGCACGCCC AGCTACATCG GCACGAAGCA CCTGTCCAAC
CTGCTTTACA CCCTCGGGGT GTCCATGCAC CTGACGCCTG AGGTGGAATG CTCCATGGAG
GCCAATCCGG AAAGCGTGAC GCCCGAGCTC ATCCGCGACA TCTACGCGCT GGGGGTGAAC
CGCCTGTCCA TCGGCGTGCA GAGCTTCGAC GACGAGCTGC TCAAGCGCAT GGACCGTATC
CACGATGGGG CCCGCGCCAA AGAGGCCATC GCCATGGCCC AGGAGCGCTT CGACAACGTG
TCCGTCGATC TGATGTGCGG CATCCCCGGC CAGACGCCGG AGATGTTTCT GGACAGCGTG
CAGCAGGCCG TCGACCTGGG CGTCAAGCAT GTCAGCATCT ATCCGCTTAC CATTGAGGAG
CACACGCCTC TGCAGCGCAT GGTGGACGCC GGCGAAATCG AGATTCCGGA GGACCACGAA
GACCGTGAGG CGCTCATGAT GGGCATGGCT CCCAACGTGC TGCTTCCCGC GGGGTTCCAC
CGCTACGAGG TGGCGAGCTA CGCCCTTGAC GGGTACGAGT GCGAGCATAA CAAGAAATAC
TGGACCGGCG TGCCTTACTA CGGCATTGGC GTGTCGGCCG TGACCATGAC CCAGAACGAT
TCCCGCCGCA TGCGCAAGCA GGACGGGTAC GTTGTGGACG ACCTGAACCG CCGCCAGATG
ATGGCCGAGG ACCTCATGAT GAAGATGCGC ATGTCGCAAG GCGTGTCCGT CGACGAGGTC
AAGGCCGCCG CCACCCTGCT GCCCAAAGTG CTCCAGGTGT TCCGCGACCT GCAGAAGGAC
AACCTGGTCA AGCTGGAAGA CGACCGCTAC AAGCCGACGC TTGGCGGCTG GCTTCTGGGC
AACGAGCTCT ACGGACGCAT CTATGAGCTG GCCCCTTAG
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| Protein sequence | MAYDPYKALY IHLPFCKHRC AYCDFTTRAI PKDSPEIGEY IENLVLDIRH ASREGFLSQI
ETVYIGGGTP SYIGTKHLSN LLYTLGVSMH LTPEVECSME ANPESVTPEL IRDIYALGVN
RLSIGVQSFD DELLKRMDRI HDGARAKEAI AMAQERFDNV SVDLMCGIPG QTPEMFLDSV
QQAVDLGVKH VSIYPLTIEE HTPLQRMVDA GEIEIPEDHE DREALMMGMA PNVLLPAGFH
RYEVASYALD GYECEHNKKY WTGVPYYGIG VSAVTMTQND SRRMRKQDGY VVDDLNRRQM
MAEDLMMKMR MSQGVSVDEV KAAATLLPKV LQVFRDLQKD NLVKLEDDRY KPTLGGWLLG
NELYGRIYEL AP
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