| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10220 |
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| Symbol | |
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| ID | 8394913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1165229 |
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| End bp | 1165732 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644985780 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003143406 |
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| Protein GI | 257063734 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.400927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000497289 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAACG TCGTGTCGGT CGCACCACCG CATGCCTCCG AAGAGGAGGC CGAAGCTAAA
CGTGTGGTGC AGTCCTATTC CGACTTGATA CTGCGCTTGA GCTATACCTA TTTGAAATCG
TTCCATGACG CCGAAGATCT TTGTCAGAAC ATCCTGATCA AGATGTTGAC GAAGGCCCCG
CGCTTCGAGG ATGCCGAACA CGAAAAGGCA TGGGTTATAC GCGCTACCTC GAATGCGTGC
AAAGACGTTC TGCGAAGCGG GGCGCGCGTT CGCAATGTGA GGCTGGAGGC GGCTTCTGAC
GAATCGGTCG AGATGCCGGA AGATTCGGAG GTGCTGGACG CCGTGTCCGC ATTGCCAGAG
GCTCAACGGG AGTCGGTTTT CCTGCATTAT TACGAAGGAT ACTCCATTGC GGAAGTCGCA
CGGCTGACGG GGCGCACCGA AGCTGCGGTC GCCAAGCAGT TGAGCCGAGC CCGTTTTGCT
TTGCGTCGGA TGCTGAAAGG ATAG
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| Protein sequence | MRNVVSVAPP HASEEEAEAK RVVQSYSDLI LRLSYTYLKS FHDAEDLCQN ILIKMLTKAP
RFEDAEHEKA WVIRATSNAC KDVLRSGARV RNVRLEAASD ESVEMPEDSE VLDAVSALPE
AQRESVFLHY YEGYSIAEVA RLTGRTEAAV AKQLSRARFA LRRMLKG
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