Gene Shel_10160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10160 
Symbol 
ID8394907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1160164 
End bp1161375 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content63% 
IMG OID644985775 
Productmonofunctional chorismate mutase, clade 2 
Protein accessionYP_003143402 
Protein GI257063730 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID[TIGR01805] monofunctional chorismate mutase, gram positive-type, clade 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000617885 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000765088 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGATA CGAACAAGAC GGATGCCGCT GCGGACACCA CGCCGGAGCA TGTGGTCGAC 
CTGGTTCGGT CCCGCGAGCG CATCGACGAG ATAGACAAGA AGATAGTGGA GCTGTTCTGC
GAGCGCATGG ACGTAGTCAA GGACGTGGCC GTGTACAAGG CTGCCACGGG CAAGGCCGTG
TTCGATGCGG AGCGCGAACG CCAGAAGATC GAGCGCGCAA CCGCCCAGGC CGATGCGAAG
TACGGCGAGT TCGTCGCGCC GCTGTTCACC ATGCTTATGG AGCTCAGCCG GTCTTACCAG
GACCGCCAGC TGCATCCCCA AAGCGAACTG TCCCGGTTCG TTTCGTCCAT CCCGCGTAAG
GGGGCGTTTC CCCAGAAGGC CCGTGTGGCG TGTCAAGGCG CGCTCGGCTC GTGGGCCTAT
TCCGCCACGA AGCGCATGGT CCCCGGTGCC GACATTGATT TCGAGGACAC ATGGGAAGGG
GTCTGCGACA AAGTGGCGGC CGGCGAGGCG GATTTTGGCG TCATGCCTCT TGAGAACACC
ACCACAGGCA CGGTGACCCG CGCATGGGAT CTGCTGCACG CCAAGGGGCT GTACGTGGTC
CGCTCAGTGA ACCTGCGCAT CGACCAGTGC CTGCTGGCGA AGCCGGGCAC CAAGCTCGAG
GACATCCGCG AGGTGTTCTC CCATGAACAA GGCCTTCGCC AATGCGCGAG CTACCTCGAG
TCGCTCGATG CTGGCATGAG GCGCTCCATT CGCGAGAACA CCGCAAGCGC CGCCCGAGCG
GTTGCACAGA GCGAACGGAC CGATGTGGCC GCCATCGCAT CGGCCGATTG CGCCGAACTG
TACGGCTTGG AGGTGCTGGT CCCTTCGATC CAGGACATGA AGGAGAACCT GACCAGGTTC
GCCTGTTTCG CCAAATCGCC CGTGGTCTAC GACGAGGCCG ACCGCACGTC GCTTATGCTG
ATCACGCCCC ATGAGCCTGG CTCGCTCTTC CGGGTCATAT CGCGGTTTGC AGCCCTGGGC
ATCAACATGG CCAAGCTGGA GAGCCGTCCC ATCCCGGGTC GCGAGTTCGA GTTCATGTTC
TACCTGGATG TCGAGTCGAC GCCGAAAGAC GAAGTGTTCA TGAAGGCTGC GGCGCAGATT
CCCTACATCA GCGAGCAGCT GCATTTCCTC GGGAGCTACG CCGACGTCTC GCAGGGGAGC
GAAGGCCGTT AG
 
Protein sequence
MMDTNKTDAA ADTTPEHVVD LVRSRERIDE IDKKIVELFC ERMDVVKDVA VYKAATGKAV 
FDAERERQKI ERATAQADAK YGEFVAPLFT MLMELSRSYQ DRQLHPQSEL SRFVSSIPRK
GAFPQKARVA CQGALGSWAY SATKRMVPGA DIDFEDTWEG VCDKVAAGEA DFGVMPLENT
TTGTVTRAWD LLHAKGLYVV RSVNLRIDQC LLAKPGTKLE DIREVFSHEQ GLRQCASYLE
SLDAGMRRSI RENTASAARA VAQSERTDVA AIASADCAEL YGLEVLVPSI QDMKENLTRF
ACFAKSPVVY DEADRTSLML ITPHEPGSLF RVISRFAALG INMAKLESRP IPGREFEFMF
YLDVESTPKD EVFMKAAAQI PYISEQLHFL GSYADVSQGS EGR