Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10160 |
Symbol | |
ID | 8394907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1160164 |
End bp | 1161375 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985775 |
Product | monofunctional chorismate mutase, clade 2 |
Protein accession | YP_003143402 |
Protein GI | 257063730 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | [TIGR01805] monofunctional chorismate mutase, gram positive-type, clade 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000617885 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000765088 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATGGATA CGAACAAGAC GGATGCCGCT GCGGACACCA CGCCGGAGCA TGTGGTCGAC CTGGTTCGGT CCCGCGAGCG CATCGACGAG ATAGACAAGA AGATAGTGGA GCTGTTCTGC GAGCGCATGG ACGTAGTCAA GGACGTGGCC GTGTACAAGG CTGCCACGGG CAAGGCCGTG TTCGATGCGG AGCGCGAACG CCAGAAGATC GAGCGCGCAA CCGCCCAGGC CGATGCGAAG TACGGCGAGT TCGTCGCGCC GCTGTTCACC ATGCTTATGG AGCTCAGCCG GTCTTACCAG GACCGCCAGC TGCATCCCCA AAGCGAACTG TCCCGGTTCG TTTCGTCCAT CCCGCGTAAG GGGGCGTTTC CCCAGAAGGC CCGTGTGGCG TGTCAAGGCG CGCTCGGCTC GTGGGCCTAT TCCGCCACGA AGCGCATGGT CCCCGGTGCC GACATTGATT TCGAGGACAC ATGGGAAGGG GTCTGCGACA AAGTGGCGGC CGGCGAGGCG GATTTTGGCG TCATGCCTCT TGAGAACACC ACCACAGGCA CGGTGACCCG CGCATGGGAT CTGCTGCACG CCAAGGGGCT GTACGTGGTC CGCTCAGTGA ACCTGCGCAT CGACCAGTGC CTGCTGGCGA AGCCGGGCAC CAAGCTCGAG GACATCCGCG AGGTGTTCTC CCATGAACAA GGCCTTCGCC AATGCGCGAG CTACCTCGAG TCGCTCGATG CTGGCATGAG GCGCTCCATT CGCGAGAACA CCGCAAGCGC CGCCCGAGCG GTTGCACAGA GCGAACGGAC CGATGTGGCC GCCATCGCAT CGGCCGATTG CGCCGAACTG TACGGCTTGG AGGTGCTGGT CCCTTCGATC CAGGACATGA AGGAGAACCT GACCAGGTTC GCCTGTTTCG CCAAATCGCC CGTGGTCTAC GACGAGGCCG ACCGCACGTC GCTTATGCTG ATCACGCCCC ATGAGCCTGG CTCGCTCTTC CGGGTCATAT CGCGGTTTGC AGCCCTGGGC ATCAACATGG CCAAGCTGGA GAGCCGTCCC ATCCCGGGTC GCGAGTTCGA GTTCATGTTC TACCTGGATG TCGAGTCGAC GCCGAAAGAC GAAGTGTTCA TGAAGGCTGC GGCGCAGATT CCCTACATCA GCGAGCAGCT GCATTTCCTC GGGAGCTACG CCGACGTCTC GCAGGGGAGC GAAGGCCGTT AG
|
Protein sequence | MMDTNKTDAA ADTTPEHVVD LVRSRERIDE IDKKIVELFC ERMDVVKDVA VYKAATGKAV FDAERERQKI ERATAQADAK YGEFVAPLFT MLMELSRSYQ DRQLHPQSEL SRFVSSIPRK GAFPQKARVA CQGALGSWAY SATKRMVPGA DIDFEDTWEG VCDKVAAGEA DFGVMPLENT TTGTVTRAWD LLHAKGLYVV RSVNLRIDQC LLAKPGTKLE DIREVFSHEQ GLRQCASYLE SLDAGMRRSI RENTASAARA VAQSERTDVA AIASADCAEL YGLEVLVPSI QDMKENLTRF ACFAKSPVVY DEADRTSLML ITPHEPGSLF RVISRFAALG INMAKLESRP IPGREFEFMF YLDVESTPKD EVFMKAAAQI PYISEQLHFL GSYADVSQGS EGR
|
| |