| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10100 |
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| Symbol | |
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| ID | 8394901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1153243 |
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| End bp | 1154679 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985769 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_003143396 |
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| Protein GI | 257063724 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000697976 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGAAA GCCTTTCCGA CCGACTTCAA AACATATTCA GCGGGCTGCG CGGCAAGGGC
CGCCTGACGG AGGACGACAT CAACTCCGCC ATGCGCGAGA TCCGCATGGC GCTGCTCGAG
GCCGACGTCA ACTTCAAGGT TGTCAAGCAG TTCACGGCCG ACACCAAGCA GCGCTGCCTT
GAGGCCGAGG TGCTGGAGTC GCTGACGCCC GCCCAGAACG TGGTGAAGAT CGTCCTTGAC
GAGCTGACCA AGCTCTTGGG CGAAAACGAC GCCAAGCTCA ACACCTCGAG CCGCATCCCC
AACGTCATCA TGCTGGTGGG CCTGCAGGGC TCCGGCAAGA CCACCGCCGC GGCCAAGCTG
GCGTACCTGC TCAAGGGCAA GGGGCATGTG CCCCTGCTGG TCGCAGGCGA CGTGTACCGT
CCCGCAGCGG CCGACCAGTT GGAAACCCTG GGCGGCGAAA TCGGCGTCAA GGTGTTCCGC
GGCGACGGCA AAGATCCCGT CCAGATTGCC AAGGACGGCG TCCGCTACGC CATCGACAAC
CTGCGCGACG TGGTTATCGT CGACACCGCC GGCCGTCTGC ATGTGGACGA GCAGATGATG
GACGAGGCCG CGGCCATCAA GGAGGCCGTC AAGCCTGAGG AGATCCTCAT GGTGGTCGAC
GCTATGACCG GCCAGGACGT GGTCAACGTG GCGTCTGCCT TCGCCGAGAA GGTGGAGTTC
GACGGCGTGA TCATGTCCAA GATGGACGGC GACGCCCGCG GCGGCGGCGC CCTTTCCCTC
AAGCAGGTCA CCGGCAAGCC CATCAAGTTC ATTTCCGCAG GCGAGAAGCC TGACAGCCTC
GAAGAGTTCC ATCCCGACCG TATGGCCAAG CGCATCCTGG GCATGGGCGA CGTGGTGTCC
CTCATCGAGC AGGCGTCCAA GATCCAGGCG GAAGAGATCG AAGAGGAGCA GGCCGAGCGT
TTGGCCCGCG CCGACATCAA CCTGAACGAC TTCCTGGAGA TTCGCCGCCA GGTGAACAAG
ATGGGCGGCA TCTCCAAGCT GCTGTCCGCC ATGCCGGGCG GCGACAAGGC CATGGCCGAA
GGCAACGTGG ACATGAAGGC CCTCGACCGC ATGGAGACCG TCATCTACTC CATGACCGCC
CACGAGCGCG AGCATCCCGA AGTGCTCAAC GCGTCCCGCC GCCAGCGCAT CGCCGCCGGC
TGCGGCCTGA CCGTCCAAGA CGTCAACCAG GTCATGAAGC AGTTCAACGA GACCCGCAAG
ATGGTCAAGC AGATGATGCG CAAGCAGGAG CAGGCCATGG GCAACCGGGC CTCCCGCCGC
AAGGGCAAGA AGGGCAAGAA GGGCAAGCGC GGCATGGGCC GCGGCCTGAT GCCCGGTGGC
ATGTCCATGG GGCAGATGCG CGACCTGCAG AAGATGTTCG AAGACGCCGG CATGTAG
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| Protein sequence | MFESLSDRLQ NIFSGLRGKG RLTEDDINSA MREIRMALLE ADVNFKVVKQ FTADTKQRCL
EAEVLESLTP AQNVVKIVLD ELTKLLGEND AKLNTSSRIP NVIMLVGLQG SGKTTAAAKL
AYLLKGKGHV PLLVAGDVYR PAAADQLETL GGEIGVKVFR GDGKDPVQIA KDGVRYAIDN
LRDVVIVDTA GRLHVDEQMM DEAAAIKEAV KPEEILMVVD AMTGQDVVNV ASAFAEKVEF
DGVIMSKMDG DARGGGALSL KQVTGKPIKF ISAGEKPDSL EEFHPDRMAK RILGMGDVVS
LIEQASKIQA EEIEEEQAER LARADINLND FLEIRRQVNK MGGISKLLSA MPGGDKAMAE
GNVDMKALDR METVIYSMTA HEREHPEVLN ASRRQRIAAG CGLTVQDVNQ VMKQFNETRK
MVKQMMRKQE QAMGNRASRR KGKKGKKGKR GMGRGLMPGG MSMGQMRDLQ KMFEDAGM
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