Gene Shel_10040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10040 
Symbol 
ID8394895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1145976 
End bp1146527 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID644985763 
Productpredicted metal-binding protein, possibly nucleic-acid binding 
Protein accessionYP_003143390 
Protein GI257063718 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000141201 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000328703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGATCG AGGGTCTGGT AGTAGATGTT CCTCAAGCGC TCTTCGCAAC CGCGGAGAGC 
GCTTCTTATG AGGGCATCTT CGAAATCGAT GCAATTGACA TGGGTCCCGA CGTCTACACG
CCGGAAGGTC CCTTCGAATG GAGCGCCCTG CTGACGAACG TCGGCGGCGC CATCCTGGTA
TCCGGAACGG TTGCCGGCTC GGTGTACACC GACTGCGCGC GTTGCCTGGA GAAGGCGTCC
TTCGATGTGG AAGGCGAGAT CGAGGGCTAC TTCATCATCC CCGGACAAGG TGAGGCCCCC
GAGGATATGG ACGAAGACGA GTTCGACGAG CTGCCCGAGG ACAACCGGCT CGATTTGGAG
CCGCTGGTCA TGGCGGGCAT CGTCATCGAC CTGCCGCTCG TTCCGCTGTG CAGCGAGGAC
TGCAAGGGCC TGTGCAGCCA GTGCGGCGCC AACCTGAACG AAGGCCCGTG CGGATGCACG
CATGACGAAG AGGAAACTAT CAGCGCAAGC AATCCCTTTG CGGTGTTGAA AAACATAGAA
TTCGAACAAT AG
 
Protein sequence
MRIEGLVVDV PQALFATAES ASYEGIFEID AIDMGPDVYT PEGPFEWSAL LTNVGGAILV 
SGTVAGSVYT DCARCLEKAS FDVEGEIEGY FIIPGQGEAP EDMDEDEFDE LPEDNRLDLE
PLVMAGIVID LPLVPLCSED CKGLCSQCGA NLNEGPCGCT HDEEETISAS NPFAVLKNIE
FEQ