Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10040 |
Symbol | |
ID | 8394895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1145976 |
End bp | 1146527 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985763 |
Product | predicted metal-binding protein, possibly nucleic-acid binding |
Protein accession | YP_003143390 |
Protein GI | 257063718 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000141201 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000328703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGATCG AGGGTCTGGT AGTAGATGTT CCTCAAGCGC TCTTCGCAAC CGCGGAGAGC GCTTCTTATG AGGGCATCTT CGAAATCGAT GCAATTGACA TGGGTCCCGA CGTCTACACG CCGGAAGGTC CCTTCGAATG GAGCGCCCTG CTGACGAACG TCGGCGGCGC CATCCTGGTA TCCGGAACGG TTGCCGGCTC GGTGTACACC GACTGCGCGC GTTGCCTGGA GAAGGCGTCC TTCGATGTGG AAGGCGAGAT CGAGGGCTAC TTCATCATCC CCGGACAAGG TGAGGCCCCC GAGGATATGG ACGAAGACGA GTTCGACGAG CTGCCCGAGG ACAACCGGCT CGATTTGGAG CCGCTGGTCA TGGCGGGCAT CGTCATCGAC CTGCCGCTCG TTCCGCTGTG CAGCGAGGAC TGCAAGGGCC TGTGCAGCCA GTGCGGCGCC AACCTGAACG AAGGCCCGTG CGGATGCACG CATGACGAAG AGGAAACTAT CAGCGCAAGC AATCCCTTTG CGGTGTTGAA AAACATAGAA TTCGAACAAT AG
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Protein sequence | MRIEGLVVDV PQALFATAES ASYEGIFEID AIDMGPDVYT PEGPFEWSAL LTNVGGAILV SGTVAGSVYT DCARCLEKAS FDVEGEIEGY FIIPGQGEAP EDMDEDEFDE LPEDNRLDLE PLVMAGIVID LPLVPLCSED CKGLCSQCGA NLNEGPCGCT HDEEETISAS NPFAVLKNIE FEQ
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