Gene Shel_09950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09950 
Symbol 
ID8394886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1137834 
End bp1138709 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content64% 
IMG OID644985754 
Producthypothetical protein 
Protein accessionYP_003143381 
Protein GI257063709 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000349861 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000215477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGAAT TCAAAGAGCA TGCGCTAAGG ACCGTTTCGA CCGGTACGCT GCTGAACCCG 
GACCAAACCT CGATGACGGT GGGGGAGCTC ACCCGCTATC TGCTGGGACG TTTCCCGGCG
CAGGATGCGG AGGATTGGGA TAAGACCGGG CTTCTGGTGG GCGATCCCGC CGAAGAGCTG
CGGGGCGTGG CCATCGCGCT CGATCCGACC GCCGCAGCCG TGCGGGCCGC CGCGGGTATG
GGCGCCAACG TGCTTCTGAC CCACCATCCG GTGTTTCGGG AAGGCCCCGA ATCCATCGTC
GCAGGCGGTT GCAGCTATTC CGGATCCATC GTGTTCGAAG CCATCCGCTC CGGCGTCGCT
CTCATGAACT TCCATACAGC GCTCGATGTG AGCCACGAAG CCCAGCTCAT ACTGCCGGGC
CTTCTGGGTT TGGAGTGTTC GGGCGTGCTC GAACCTTTGG AGCGCGATGA GACCAAGGGC
TATGGCCAGG TGTGCGAACT TGACGAGGCG CCTATGACGT TGGACGAGCT GGCGCGCCGC
TGTCTGGCCG TGTTCGGCCG CACGCCCCGC GTGTGGGGTG ACCCCGCCAC CGAGCTGCAT
ACGGTGGCGA CGTGGACGGG TTCCTGCGGT AACGCCACCG AGCTGTGCCT TGACCAGGGT
GTGGACGCCA TCGTGTGCGG CGAGGTCAAG TACCATGCTG CCCTGGATGC GAGCCAGCAA
GGACTCTGCG TCGTCGATCT GGGCCACGAT GTGTCGGAAT TGCCGTTTAC CCGTGTATTG
GCTGACGCCT GCGTCGAAGG CGGCGTCAGT TCGGATATCA TCAGCATCGT CGAACAGAAC
GACAATTGGT CGCATCCTGA GGCGAGGAGG GCGTAA
 
Protein sequence
MAEFKEHALR TVSTGTLLNP DQTSMTVGEL TRYLLGRFPA QDAEDWDKTG LLVGDPAEEL 
RGVAIALDPT AAAVRAAAGM GANVLLTHHP VFREGPESIV AGGCSYSGSI VFEAIRSGVA
LMNFHTALDV SHEAQLILPG LLGLECSGVL EPLERDETKG YGQVCELDEA PMTLDELARR
CLAVFGRTPR VWGDPATELH TVATWTGSCG NATELCLDQG VDAIVCGEVK YHAALDASQQ
GLCVVDLGHD VSELPFTRVL ADACVEGGVS SDIISIVEQN DNWSHPEARR A