| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09910 |
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| Symbol | |
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| ID | 8394882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1133686 |
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| End bp | 1135281 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644985750 |
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| Product | tRNA/rRNA cytosine-C5-methylase |
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| Protein accession | YP_003143377 |
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| Protein GI | 257063705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000618646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGCGCAT ACAGAGGCCG TGAGGGCATG AACTCGAATC GCGGTGACGG ACAGGGCGGC
CGAGGCGGAT CGCCCCGGGA TGCGCATGGC GACCGCGGCG GCTACAAAGG CCGCAGCGAC
TCCCGCGAAC GTTCGAATGG GCGCAAAGAC GCGGACGGCA GACGCGTCGG CGGCGGCCGC
CGCGTGTATG TGGGAAACGG CGGCCGCAGC GGCGGCAACG CCCGGGCATC CCATTCGGGA
AGGTCGTCCC AGGCTCCGCG ACGGCTCGAG AACCATGCGT CCCCGGCCCG TATCGCCGCC
TGTTTGAGCT GTCGGATCGT ACGAGAGCGC GATGCATTCG TCTCCGAGGT CGTGCCCGGC
GTGGTCTCTC GCATGGGGCC GATGAAACCC GAGGACGTAG CCTTCGCCAC ACGGCTTGCC
CGAGGCGTGG TGGCGACCAG CGGCGCTTTG GACGATTTCA TCAACCGCAA CCTGTACAGC
CCGGCCGACA TCCAGCCCAA CGTGCGCGAT GCGCTCCGCG TGAGCGCCTA CGAGCTTCTG
TACCTGAAGA AAGACGACTA CGTAGCCGTC GACCAGGGTG TCGAGCTGGT GGCGTACGTA
GAACCGAAAG CCCGGGCGCT GGCAAACGCC GTGCTTCGCA AGATGGCGCG AACGGCTTCG
CGCTGGCCTT TCGGCGACGT GGGCACCGAT GTGGTGGCGC TGTCCCGCAA GGTCGCCTTT
CCCTCTTGGA TGGCTAAGCG GCTCGTGGAG GAGATGGGTC GCGAGCAGGC CGCCGCGTTC
ATGGAGGCTT CCAACGGCGA TGCCCCCGTG CATGCGGCCG TCAACGCCAT TCGCGCCACG
GACGAAGAGG TGTTGGCCGT GCTGCAGGAG CAGGGGGCCG ACCCGAACCT TGTGGAAGGC
ATCCCCGGGT GCATCCGCAT CGGGACGCCT AAGGCCATCC GCAGCGATGT GGTGACTAAG
CTGTTCGAGG ACGGCAAGGT GCTGATTTCG GACCCGTCGG CCCAGAAGGT CGCCTCCTTC
GCCCTGCCTG GCGAGCCTCC TTCGGCGTTT ATCGAGGTGG GAAGCGGACG CGGAACCAAA
ACCGTGCTCA TGCAGAGCAA CGCGATGCGC AAGTACGGCA AGCAGTTCCC GATCGTGTCG
GTGGACGACC ATCCGTTCAA GGCCAAGCTG CTGCGCAACA GGGCCCGCGA ATACGGCCTC
ACGTCGGTGC AGACGAAGGT GGCCGACGGT AGGAAGCTCA CGTCGCTGTA CGAGAAGGGC
AGCTTCGACG CGGTGTTTGT GGACGCTCCC TGTTCGGGGG TGGGCACGCT GCGCCGCCAC
CCCGAGATCC GCTGGCGCCT GACAGAGCGA GACGTGGCCA AGATGGCCGA TGTGCAGCTG
GACATCCTCA TCGATGCGGC GTCGCTCGTC AAAACGGGCG GCCAGGTGGT CTATTCCACC
TGCACCGTCT TCCGTGAGGA GAACGAGCGG GTGGTGGAGC GCTTCCTGAA AACCAAGTTC
GGCGAGCGGT TCGAGATGAC CGAAATGTTG AAGATGTCGC TTGAGGAAGA CGGCCCCGAC
GCCCATTTCG CGGTGCGCCT GACCAAGCGT TTCTAA
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| Protein sequence | MCAYRGREGM NSNRGDGQGG RGGSPRDAHG DRGGYKGRSD SRERSNGRKD ADGRRVGGGR
RVYVGNGGRS GGNARASHSG RSSQAPRRLE NHASPARIAA CLSCRIVRER DAFVSEVVPG
VVSRMGPMKP EDVAFATRLA RGVVATSGAL DDFINRNLYS PADIQPNVRD ALRVSAYELL
YLKKDDYVAV DQGVELVAYV EPKARALANA VLRKMARTAS RWPFGDVGTD VVALSRKVAF
PSWMAKRLVE EMGREQAAAF MEASNGDAPV HAAVNAIRAT DEEVLAVLQE QGADPNLVEG
IPGCIRIGTP KAIRSDVVTK LFEDGKVLIS DPSAQKVASF ALPGEPPSAF IEVGSGRGTK
TVLMQSNAMR KYGKQFPIVS VDDHPFKAKL LRNRAREYGL TSVQTKVADG RKLTSLYEKG
SFDAVFVDAP CSGVGTLRRH PEIRWRLTER DVAKMADVQL DILIDAASLV KTGGQVVYST
CTVFREENER VVERFLKTKF GERFEMTEML KMSLEEDGPD AHFAVRLTKR F
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