| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09880 |
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| Symbol | |
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| ID | 8394879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1129864 |
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| End bp | 1131951 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985747 |
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| Product | primosomal protein N' |
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| Protein accession | YP_003143374 |
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| Protein GI | 257063702 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.738581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00505641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACCG CTTCCGTCAT ACTCGATATC AACACGCAGT CGCTCGACTC GTCCTACACC
TACGCCGTAC CTGATGACAT GGAAGGTGTG GAGGTGGGCT GCCCGGTGCT GGTGGAGTTC
GGGCGCCGTC AGGCGGTGGG CTATGTCATG AGCGTGGCCC CGCTGGACGA GGCGGACGAG
TTGCCGGACG CATCCAAACT CAAGCCCCTT CTCGCAGTGC TTGGCGAATC ATGTTTTGAC
GAACATGCCG CAGCGCTGAT CGAACACATG GCTTACACAT ACATCGCGCC TTTGAGCTCA
TGCATCCATC TGTTCACGCC GGCCGGTCGC ACGCCCAAGG TGGTGAAGGA CGGTGACGGA
TGGCGGTTGC AGAAACCTGC CAAGCGCCGT GCCAGAAAAG ACGCCGTCGA CGACGGTGAG
CCCGAGGTCC GAACGTCAAA TGACGATTTG TCGTTGACCG AGGGGCAAAA GGCGGCTTTC
GACGCCATAT CCGAGGCCAT CGACGGCAAG CCGGACGCCG GTCGCTGCAT CGTGGTGGAC
GGCGTGACCG GCTCTGGAAA AACGGAGGTC TACCTGCGCT CCATCGGAAA AGTGCTCGAG
GTGGGGCAGG GCGCCATCGT CCTTGTGCCC GAAATCGCAC TGACTCCTCA GACGGTGGCC
CGCTTCAAAG GACGATTCGG CAACACAGTG GCGGTCATGC ACTCCAACAT GACCCAGGCC
CAGCGCTACG ACGAATGGAC CGCCGTCAAA CGGGGTGAGC GCCGTGTAGT GGTGGGTGCC
CGAAGCGCCC TGTTCGCACC TGTTGGTCGG CTGGGGATCA TCATCATCGA CGAGGAGCAC
GAAAGCACCT ACAAACAGGA AAGCGCCCCG CGCTACCATG CCCGCGACAT CGCCGTATGG
CTCGGTGACC GCCTCGGGAT CCCGGTGGTT CTGGGGTCGG CAACGCCTTC CATCGAGTCG
CTTCACGCCT GCGCTACCAA GCCGGGCTGG CGCAAGGTGG ATTTGCCGGA GCGTGCCAAC
GGCAAGCCCA TGCCCGATGT GGAAGTGGTT GACATGGCGA AGGAGTTCCA CTCCGGGTCG
CGTTCCATGT TCTCGAAGCG CCTGACCCAG GCCCTGTTCG AAACCGTGGA CGCGGGACAC
AAGGCCGTGC TGCTGCTCAA CCAGCGCGGG TTCGCCAATT TCATGCTGTG CCGCGATTGC
GGGTTCGTGC CCGAATGCCC CACATGCTCG GTGTCGCTGA CCTACCACGA GGTTGAGCAT
GCCCTGATCT GCCACCATTG CGGGCGCCGT CAGCCCGTTC CCGCACGCTG CCCCGAGTGC
GGAAGCCCGT ACCTGCGCAA GTTCGGGGCC GGCACGCAGC GGGTCGAATC CGAGCTTAAG
GCTCTGCTCG AGGGGCGGGA CGTGCCTGTC ATTCGCATGG ATTCGGACAC GACCTCCACC
CGGAACGCCC ACGAGGAGCT GCTGAAACGG TTCGCCCGCC CGGGCGCGTC GGTGCTTCTG
GGCACGCAGA TGATCGCCAA GGGACTGGAC TTCGACGAGG TGACGCTGGT CGGTGTCATC
AATGCGGACA CCCAGCTCAA GCTGCCCGAT TTCCGCAGTG CGGAGCGGAC CTTCGACCTG
ATTCAGCAGG TGGCGGGCCG AGCGGGCCGC GGCGTTTTCG CAGGCAAGGT CTACGTGCAG
ACCTACGTTT CCGAAAGCGT GGCCGTGCAG GCCGCGGCGC ATTACGACCG AAAGCGGTTC
CTTATCGACG AGCTGCCTAA ACGCAAGATG CTCAGGTATC CGCCCTACGC GCGCATCGCC
GACGTGCTGG TCTGGGGACA TGACGCCCAA GAGGTCCAGA AGGCCGCCCA GGCGCTGGCG
CAGCGGGTCG AAGCGGCCTT GCACGACAAC GGGGGCGAAG GCTGGGTGTC CTTCGGTGCG
GCTCCCTGTC TGCTCAGCAA GATCCGCAAC ATGTACCGCT GGCACATCCT TGTCAAGGCG
CCCGCAGGCG CAGACGTCTC GGCGGTGCTT TCGCCGGTCA TGCGCTCCCG AAAGGCGTCC
AAGACGGTCA ACGTCGCCTG CGATGTGGAC CCGTTGAGCG TCCTTTAG
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| Protein sequence | MKTASVILDI NTQSLDSSYT YAVPDDMEGV EVGCPVLVEF GRRQAVGYVM SVAPLDEADE
LPDASKLKPL LAVLGESCFD EHAAALIEHM AYTYIAPLSS CIHLFTPAGR TPKVVKDGDG
WRLQKPAKRR ARKDAVDDGE PEVRTSNDDL SLTEGQKAAF DAISEAIDGK PDAGRCIVVD
GVTGSGKTEV YLRSIGKVLE VGQGAIVLVP EIALTPQTVA RFKGRFGNTV AVMHSNMTQA
QRYDEWTAVK RGERRVVVGA RSALFAPVGR LGIIIIDEEH ESTYKQESAP RYHARDIAVW
LGDRLGIPVV LGSATPSIES LHACATKPGW RKVDLPERAN GKPMPDVEVV DMAKEFHSGS
RSMFSKRLTQ ALFETVDAGH KAVLLLNQRG FANFMLCRDC GFVPECPTCS VSLTYHEVEH
ALICHHCGRR QPVPARCPEC GSPYLRKFGA GTQRVESELK ALLEGRDVPV IRMDSDTTST
RNAHEELLKR FARPGASVLL GTQMIAKGLD FDEVTLVGVI NADTQLKLPD FRSAERTFDL
IQQVAGRAGR GVFAGKVYVQ TYVSESVAVQ AAAHYDRKRF LIDELPKRKM LRYPPYARIA
DVLVWGHDAQ EVQKAAQALA QRVEAALHDN GGEGWVSFGA APCLLSKIRN MYRWHILVKA
PAGADVSAVL SPVMRSRKAS KTVNVACDVD PLSVL
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