Gene Shel_09860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09860 
Symbol 
ID8394877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1126876 
End bp1128237 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content61% 
IMG OID644985745 
Producthypothetical protein 
Protein accessionYP_003143372 
Protein GI257063700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.726307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.031392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCTGA ACAGCACCTA CACCAATGAA TACTTGAGCA TCGTCTCGCA GCTCGATGGC 
GACGTGGAAG GAAAGCGCAA GGCCCGCACG TACATGGGGA ATTCGACGGC CATCTACCAT
GGCGTCATCG TGGATTCGGC CTTCGTGCCG CGCCTGTTCG ACGCCGAAAC CAAGGCCCGT
TTCACCTACA TCGCCGAAAC GACCTATTCC ATCCTGTGCA AGGTCATGCA GGAATACATC
GACAACCCGG ACTACCGCCA CGTCTACGAC TTTGACGAGC GCCTGGTCGA TCTGGTGCTG
CTCCCCCGCA ACTACGACGC TCTGCTGCCC TTCGCCCGCG TCGACGTGTT CCTGAACGAA
GACACCCTCG AGGGCCAGTT CTGCGAGTTC AACGGCGACG GGTCCAGCGG CATGAACGAG
AACCGCGAAA TCACACGCTC GGTGGAAGGC ACCGCCTCCT ACCAGGAGTT CGGACGCCGC
CACAAGCTGG AAACCTGCAC CGAGTCGCTG TTCGGCGGCT GGGTCCGCGA GTTCCTCAAC
ATCTACAGCA CCTACGCCTA CAAGGTGGAG CATCCCCACA TCGCCATCGT CGACTTTTTG
GAGAACGCCA TCGTCGACGA ATTCGGCATC TTCTGCGGCA TGTTCGAGGA GGCCGGCTAC
CACTGCACCA TCTCCGACGT GCGCGACCTG ACCTTCGACG GCGAACACCT CATCGACCAG
AACGGCGAGG TCATCGACGC CATCTGGCGC CGCAGCGTGA CCAACGACAT CATCGAGCAC
TGGGAGGAGT CCCAACCCCT CATCCAGGCC GTCCGCGCCG AGAAGGTTGC GCTCATCGGC
AGCTTCGCCG GGCATCTGGT CCACGACAAG CAGATCTTCA GCGTGCTGTT CAAGCCCGAG
ACCCAGGCCA TCCTCACCGA CGAGGAGAAC GCCTTCGTGC GCGACTTCGT ACCCTACACC
ACCTTCCTGG ACAGCGAATG CATCAACCTG GACGACGTGA AGGCCGAACG CACCAAGTGG
ATCATCAAAC CCACCGACGG CTACGGCTCG GCCGACGTAT ACGCCGGAAA GGACTTCGAT
GATGCGGCAT GGGGCCAGCT CATCGACAAG TTCGCCAACG GTGCCGCCGG CGCTCCCTTC
CTGATCCAGA CCTACTGCAC CCTGTACAAG ACGCTGACAC TGCCCCTGTA CGGGGAGGAC
GCAGACTACC GCGACAACCC GGCTCTGGCG TACAGCAACA TGTCAGGCGT CTATATATAC
AACGGCCGGT TCGCGGGCGT TTTCTCGCGC CTGGGACCCA ACCCCATCAT CTCCAAGAAG
ACTCGGGGCA TCACCGCCGC CTCGATCTGG GTGGATTGTT AA
 
Protein sequence
MTLNSTYTNE YLSIVSQLDG DVEGKRKART YMGNSTAIYH GVIVDSAFVP RLFDAETKAR 
FTYIAETTYS ILCKVMQEYI DNPDYRHVYD FDERLVDLVL LPRNYDALLP FARVDVFLNE
DTLEGQFCEF NGDGSSGMNE NREITRSVEG TASYQEFGRR HKLETCTESL FGGWVREFLN
IYSTYAYKVE HPHIAIVDFL ENAIVDEFGI FCGMFEEAGY HCTISDVRDL TFDGEHLIDQ
NGEVIDAIWR RSVTNDIIEH WEESQPLIQA VRAEKVALIG SFAGHLVHDK QIFSVLFKPE
TQAILTDEEN AFVRDFVPYT TFLDSECINL DDVKAERTKW IIKPTDGYGS ADVYAGKDFD
DAAWGQLIDK FANGAAGAPF LIQTYCTLYK TLTLPLYGED ADYRDNPALA YSNMSGVYIY
NGRFAGVFSR LGPNPIISKK TRGITAASIW VDC