| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09840 |
|---|
| Symbol | |
|---|
| ID | 8394875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1124535 |
|---|
| End bp | 1126013 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644985743 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_003143370 |
|---|
| Protein GI | 257063698 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.224887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA CCGTGCGCGT CCGCTTCGCG CCTTCGCCTA CCGGCAAGCT GCACATCGGC
GGAGCGCGAA CCGCAATCTA CAACTGGGCG TTCGCCCGCG CCATGGGCGG CACCTTCGTC
CTGCGCATCG AAGACACCGA CCCCGAGCGC TCTACTGAAG AGAACACGCA GGTCATCCTG
CGCGCCATGC GCTGGCTCGG CCTGGACTGG GACGAAGGTC CCGAGGTAGG CGGCGATTTC
GGCCCCTATC TGCAGACCCA GCGCTTCGAC ACATACGCCG CCGCCCTTGA AACCCTCAAG
CAGCGCGATG CCGTCTATCC GTGCTTCTGC ACCAAAGAGG AGCTGGACGC CAAGCGCCAG
GCCGCCGAAA GCGCAGGCCA GGCCTACGCC GGCTACGACC GCACCTGCCG CAACCTGTCC
GCCGAAGAGG TGCAGGCCCG TCTGGACGCC GGCGAGAAGT GCTGCTGGCG CCTGAAGGTT
CCCGAGGACC ACGGCCCCAT CGAGTTCGAC GACGCCGTGT ACGGCCATAT GAGCTTCCCC
GCCGACGTCA TGGACGACAT GATCGTCGTG CGCACGGACG GCACGCCCAC CTACAACTTC
GCCGTGGTCT GCGACGACGC CAACATGGGC ATCACCCATG TCATCCGCGG CGACGACCAT
CTGTCCAATA CCCCGCGTCA GATTCTCATC TACGAGGCTT TGGGCCTCAC CCCGCCTACC
TTCGCGCATC TGTCCATGAT CCTGGGCGGC GACGGCAAGA AACTGTCCAA GCGCCACGGC
GCCACCAGCG TCGAAGAGTA CCGCGACCAG GGATTCCTGT CCGACACCAT GGTCAACTTC
CTGGCGTTGC TGGGCTGGAG CCTGGACGGC GAAACCACCA TCATCCCCCG CGATGTGCTG
TGCAAGGAAT TCAGCTTGGA CCGCATCACG AAGAAAGACG CCGTCTTCGA CGAAACCAAA
CTGCTGTGGA TGAACGGCCA GTACATCAAG GAGATGGACC CCGCCGAATG GGTTCGCCTG
AGCCGTCCCT GGCTGATCGA GGCCGGCGCC ACCGAGGAGG ACATCGACGC CAACCCCGAG
AAGTACGCCG CCATGTACCC GCTGCTGGCC GAACGCGAGC AGCGCCTGTC CGATGCGGCC
GAGAAGCTTC CGTACCTGTT CTGGGGTCCC AAGGTCGAGC TGGACGAGAA GTCCGTCAAC
AAGGTCCTGC TCAAAGAGGG CGCCCGCGCC GAAGAGGTGC TGCGCGCCGC CCGGGACATC
ATCGCCGACG AGTCCATCGA ATGGGCCTGC GACCCGCTGC AGGACGCCTG CCGCGCCCTT
ACCGAGAAAC TGGACATGAA GGCGAAGCTC GTCTTCCAGC CCATCCGCGT GGCCGTCTGC
GGCAACATGG TTTCGCCCCC GTTGTTCGAA TCCATCGAGC TTATGGAACG TGCCGACATC
GTCGCCCGCA TCGACACCGT TCTGGAGCAG GTGTTCTAA
|
|---|
| Protein sequence | MNNTVRVRFA PSPTGKLHIG GARTAIYNWA FARAMGGTFV LRIEDTDPER STEENTQVIL
RAMRWLGLDW DEGPEVGGDF GPYLQTQRFD TYAAALETLK QRDAVYPCFC TKEELDAKRQ
AAESAGQAYA GYDRTCRNLS AEEVQARLDA GEKCCWRLKV PEDHGPIEFD DAVYGHMSFP
ADVMDDMIVV RTDGTPTYNF AVVCDDANMG ITHVIRGDDH LSNTPRQILI YEALGLTPPT
FAHLSMILGG DGKKLSKRHG ATSVEEYRDQ GFLSDTMVNF LALLGWSLDG ETTIIPRDVL
CKEFSLDRIT KKDAVFDETK LLWMNGQYIK EMDPAEWVRL SRPWLIEAGA TEEDIDANPE
KYAAMYPLLA EREQRLSDAA EKLPYLFWGP KVELDEKSVN KVLLKEGARA EEVLRAARDI
IADESIEWAC DPLQDACRAL TEKLDMKAKL VFQPIRVAVC GNMVSPPLFE SIELMERADI
VARIDTVLEQ VF
|
|---|
| |