| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09820 |
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| Symbol | |
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| ID | 8394873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1123051 |
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| End bp | 1123449 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644985741 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_003143368 |
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| Protein GI | 257063696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.390629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGT TCATGGATGA GTTCAAAGAG TTCATCGCCC AAGGCAACGT CATGGACATG
GCTGTCGGTA TCATCATCGG CGGCGCGTTC ACCGCTATCG TCACGGCCCT GACCGAAGAC
ATCATCAACC CGCTCATCAC CCTTATCACG GGCGGCGGCG TTGACAGCGT GGGCGCTCTG
AACATCGCCG GCATGGACTT CGGCGCATTC ATCTCCGCCA TCCTGAACTT CCTGATCATC
GCATTCGTGG TGTTCTGGCT GGTCAAGAGC GTCAACAAGC TGCAGAAGCT TGCCGGCATG
GAAAAGCCTG CCGAAGCGCC TGCCCCCACC TGCCCCCATT GCCTCGAAGA GGTCAAGGAA
GGCGCCACCC GTTGCCCGCA TTGCGGCGGC GAGATCTAA
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| Protein sequence | MKKFMDEFKE FIAQGNVMDM AVGIIIGGAF TAIVTALTED IINPLITLIT GGGVDSVGAL
NIAGMDFGAF ISAILNFLII AFVVFWLVKS VNKLQKLAGM EKPAEAPAPT CPHCLEEVKE
GATRCPHCGG EI
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