| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09770 |
|---|
| Symbol | |
|---|
| ID | 8394868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1118271 |
|---|
| End bp | 1119209 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644985736 |
|---|
| Product | predicted permease |
|---|
| Protein accession | YP_003143363 |
|---|
| Protein GI | 257063691 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.554109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCC TGGCTGTAGC ACTCAACGCG GTCATGCCGT TTTTCGTCTA CCTGATGGTG
GGCAAGATCG CGCGTGCCCT GCATTGGGCC GACGAGGATT TCTTCAGCAG ACTCAACACC
TTCTCGTTCA ACACGCTGTT CCCCATCATG ATGTTCAGCA CCGTCTACCA GGTGGAGACC
GATTACGCCG TCAACTGGCT TTTCGTAGGA ACCGCACTCG CCAGCGTGCT TATCGTCATC
GGCATCGCCA TGGCCGCGGT GCCGCGCCTG GTCGGCGGCC CGCCGCGCCA AGCCGTGGTG
GTGGAGGCGC TGCACCGTTC GAACATCATC CTGTTCGCGT TGCCGCTGAC CTACAGCATC
TACGGGGACG AATGCCTCAT TCCCGTCACG TCGGTCATCG CGCTGATCGT CCCCACCTAT
AACATCGTCG CCGTCATGAT ATTCGAATAC TTCCGCGGCG CTTCCCCCAC CCCGCTGTCG
CTCGCGAAAA GCGTCATCAA GAACCCGCTC ATCCAGGGAT TCATCGTGGC CACGCTCGTC
CGCTTCCTGC ATATCGACCT GCCTGGTTTT CTGGATGCTC CCATCCACAC GCTGGGAAGC
ATCGCGACGC CTCTGGCGCT CATCGCGCTG GGCGGCACCC TGCACATCCA CGAGATGCAG
GACAACATGG GGCTCATGGT GCCTGTCCTC ATCATCAAAA TGATCGTCCT GCCCCTCTGC
ATCCTGCCGT TGAGCCTGGC CCTCCCCTTT TCGGGCGTCG AGCGGTTCGT GCTGCTCGTC
ATGTATGCGG CACCTGTCGC TACGGCCACC TTCCCCATGG CGTCGACCAT GGACGGCGAC
GGGCCGTTGG CAGGCGAGCT TGTGGTCTTG AGCACCGTGG TTTCCGTCGG CACCTTATTC
GTTTGGATTG TCGCGTTGGG AACCGCCGGC CTGCTTTAA
|
|---|
| Protein sequence | MESLAVALNA VMPFFVYLMV GKIARALHWA DEDFFSRLNT FSFNTLFPIM MFSTVYQVET
DYAVNWLFVG TALASVLIVI GIAMAAVPRL VGGPPRQAVV VEALHRSNII LFALPLTYSI
YGDECLIPVT SVIALIVPTY NIVAVMIFEY FRGASPTPLS LAKSVIKNPL IQGFIVATLV
RFLHIDLPGF LDAPIHTLGS IATPLALIAL GGTLHIHEMQ DNMGLMVPVL IIKMIVLPLC
ILPLSLALPF SGVERFVLLV MYAAPVATAT FPMASTMDGD GPLAGELVVL STVVSVGTLF
VWIVALGTAG LL
|
|---|
| |