Gene Shel_09670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09670 
Symbol 
ID8394858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1109056 
End bp1109862 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID644985726 
Product1-acyl-sn-glycerol-3-phosphate acyltransferase 
Protein accessionYP_003143354 
Protein GI257063682 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCT ACGAGAAGAT CTGGGACATG CCTGTCATGA CCGCGGCCCA GCGCGGACAG 
GGCGACGACA AGACCGAGCC GTACAGTTCG CAGGTCATGG GCAACATCAT CTACGCGGTG
GTGGGCCTCA TCTGCAAGGT CGCCTTCCGC TACAACGCCG AGGGGTTGGA AAACTTCCGT
CAGTTTGCCG GCAAACAGGG CTGCGTGGTG GTGAGCGCCC ACAGGTCGTT TTTGGATCCG
GTGTTTCTGT GGCTGACGGC CCGTCCCAGC CAATGGATCC GCTTCATGGC CCGCGAGAAC
ATCTTCCCCA AAGCCAACGG GCTTTTGGGC TGGATCTGCT CCAAGGTGGG GGCGTTTCCC
ATCAAGCGCG ATTCCGCCGA CCGTACGGCC ATCAAGCGCG CGGCGGCCAT GCTGAAGCGC
GGCGAGAACG TGGGCATCTT TCCGGAGGGA ACCCGTCGCG GCCGCGGCAC GACGAAGCTT
TCGCTGCACA GCGGTGCGGC GTTCATCGCC CGCATGGGCA AGGCGCCCAT GGTGCCGACG
GGCATCCGCA ACGTCGAGAA CATCAAGCCG CCCGAGGCCA GGTTCGTCCG CTTCCCGAAG
GTCACGGTGG TGTACGGCAC GCCTGTGAAC TTGGAAGATT TTGATTTTCT TCCGAAAGCG
GAGCGTTTGG ACGCGGCCTC TTGGTATGTC ATGCGAGAAT GCTATGCATT GCATGACGGC
GTGCCGCGCG AGGATGTGGA CATGGCGTCC CTCTTCCCAG AGGCGAAGGA CTACACCCAA
GTGTTCGCCG AACACGCCAT TCCGTAA
 
Protein sequence
MISYEKIWDM PVMTAAQRGQ GDDKTEPYSS QVMGNIIYAV VGLICKVAFR YNAEGLENFR 
QFAGKQGCVV VSAHRSFLDP VFLWLTARPS QWIRFMAREN IFPKANGLLG WICSKVGAFP
IKRDSADRTA IKRAAAMLKR GENVGIFPEG TRRGRGTTKL SLHSGAAFIA RMGKAPMVPT
GIRNVENIKP PEARFVRFPK VTVVYGTPVN LEDFDFLPKA ERLDAASWYV MRECYALHDG
VPREDVDMAS LFPEAKDYTQ VFAEHAIP