Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09620 |
Symbol | |
ID | 8394853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1104408 |
End bp | 1105187 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985721 |
Product | hypothetical protein |
Protein accession | YP_003143349 |
Protein GI | 257063677 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0183259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACC GCGTGCGACT TGACAATTTC GAAGGGCCCT TCGACCTGCT GCTGTACCTG GTGAGCCGCC AGCGCGTGGA CATCGGGTCG ATCAGCGTGT CCGAGATCGT GGACCAGTAT CTGGCCTACG TCGACCGCAT GCAGAGGCTC GACCTGGACG TAGCCAGCGA CTTTCTGCTG GTGGCGTCCA CGTTGCTGGA CATCAAGGCC GCATCCCTCA TCCCGTCGGA CGCTCCGGAG GACGTGGACC TGGACATGGA CGAGCTCACG CCCGACGAAG CCCGCGACAT CCTGGTCCAG CGCCTGTTCA CGTACCTGCA GTACAAGAAT GCGGCCGTCG ACATGAACCG TCGGTTCGAA GCGGAGGGCC GCCTGCACAC CCGCGGCGTG GGTCCCGATG CGGAGTTTCT GAACCTCATG CCCGACTACC TGCACGGCGT GAAGTTGGAC GATTTGGCGG GCATGTGCGC GAACATGATG GCCCGCCGCG AGGTGGTGCT GTTGGAAAGC GAGCACATCG CGGCCAAGCC CATCCCTTTG GAGCCCCGCG TCCGTTCGTT CTACCAGCGC ATCTCCCAGG AGAAGCACGT GAAGTTCTCG CAGCTCATGG AGGAGTCGCC TTCCGTTCCC CTTCGTGTGG TGAGCTTTCT CGCCATTCTC GAGCTGTACA AGCAGACCAT GGTCGAGCTG CTGCAGGAAG AGCAGTTCGG CGACATAGAC ATCGATTTCA TCGAGGATTC GGGCGAGCTG GTGCTTGACT CGCTGGATGA GGAGGCGTAG
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Protein sequence | MSYRVRLDNF EGPFDLLLYL VSRQRVDIGS ISVSEIVDQY LAYVDRMQRL DLDVASDFLL VASTLLDIKA ASLIPSDAPE DVDLDMDELT PDEARDILVQ RLFTYLQYKN AAVDMNRRFE AEGRLHTRGV GPDAEFLNLM PDYLHGVKLD DLAGMCANMM ARREVVLLES EHIAAKPIPL EPRVRSFYQR ISQEKHVKFS QLMEESPSVP LRVVSFLAIL ELYKQTMVEL LQEEQFGDID IDFIEDSGEL VLDSLDEEA
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