Gene Shel_09620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09620 
Symbol 
ID8394853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1104408 
End bp1105187 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID644985721 
Producthypothetical protein 
Protein accessionYP_003143349 
Protein GI257063677 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0183259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACC GCGTGCGACT TGACAATTTC GAAGGGCCCT TCGACCTGCT GCTGTACCTG 
GTGAGCCGCC AGCGCGTGGA CATCGGGTCG ATCAGCGTGT CCGAGATCGT GGACCAGTAT
CTGGCCTACG TCGACCGCAT GCAGAGGCTC GACCTGGACG TAGCCAGCGA CTTTCTGCTG
GTGGCGTCCA CGTTGCTGGA CATCAAGGCC GCATCCCTCA TCCCGTCGGA CGCTCCGGAG
GACGTGGACC TGGACATGGA CGAGCTCACG CCCGACGAAG CCCGCGACAT CCTGGTCCAG
CGCCTGTTCA CGTACCTGCA GTACAAGAAT GCGGCCGTCG ACATGAACCG TCGGTTCGAA
GCGGAGGGCC GCCTGCACAC CCGCGGCGTG GGTCCCGATG CGGAGTTTCT GAACCTCATG
CCCGACTACC TGCACGGCGT GAAGTTGGAC GATTTGGCGG GCATGTGCGC GAACATGATG
GCCCGCCGCG AGGTGGTGCT GTTGGAAAGC GAGCACATCG CGGCCAAGCC CATCCCTTTG
GAGCCCCGCG TCCGTTCGTT CTACCAGCGC ATCTCCCAGG AGAAGCACGT GAAGTTCTCG
CAGCTCATGG AGGAGTCGCC TTCCGTTCCC CTTCGTGTGG TGAGCTTTCT CGCCATTCTC
GAGCTGTACA AGCAGACCAT GGTCGAGCTG CTGCAGGAAG AGCAGTTCGG CGACATAGAC
ATCGATTTCA TCGAGGATTC GGGCGAGCTG GTGCTTGACT CGCTGGATGA GGAGGCGTAG
 
Protein sequence
MSYRVRLDNF EGPFDLLLYL VSRQRVDIGS ISVSEIVDQY LAYVDRMQRL DLDVASDFLL 
VASTLLDIKA ASLIPSDAPE DVDLDMDELT PDEARDILVQ RLFTYLQYKN AAVDMNRRFE
AEGRLHTRGV GPDAEFLNLM PDYLHGVKLD DLAGMCANMM ARREVVLLES EHIAAKPIPL
EPRVRSFYQR ISQEKHVKFS QLMEESPSVP LRVVSFLAIL ELYKQTMVEL LQEEQFGDID
IDFIEDSGEL VLDSLDEEA