Gene Shel_09580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09580 
Symbol 
ID8394849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1099538 
End bp1101082 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content60% 
IMG OID644985717 
ProductYkud domain-containing protein 
Protein accessionYP_003143345 
Protein GI257063673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00711473 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATG CTAACGTAGA GGAGCCGGCT GAGGACTTCG CAGCCGTCAA TCCTGCGGGC 
ATCCAGGGCT CGATTGCTGG TTATTCGCGC GATTCCTACG CGGGTAGGAC TTCGCAGAAA
AATGGCAAGG GTGGCCGTGT TGCCCTGATC ACATTTGGAA TATTCGCCGC TATCGCAGGG
GCTGCGTATG GTGCCGGCGC ATATTATTTC GGCAACCATT TCTACCCGAA CACCACCATG
GGTCCGCTGG ATCTGTCTCT GGCCACCCAT GAAGAGGTCA TCTCCCAAAT CGAGGATGTC
GAATCCTACT ATTCCATCAA CGTGAAGGGC GAAGGCATCG ACTTCAACAT CACGTCCGCT
GACGGCGGCA TCGATTTGGA CGCGGAAAGC GTGGTTAAGG CCGCTGCCGA TACGGTCGAT
AAATGGAAGT GGCCCGTCCA GGTCATGGAT GACCACGACC TGACCGAAGT GCTGGTGGCT
TCTTCCTCAG GCGACGTGCT GAGCGGATAC GTGGCCGAAC AGGTGGCCAC GTTCAACGAG
CCGCAGACGG TTTCCGAGGA CGCGTACATC ACGTACAAAG ACGCCGAAGA CGCCTTCGTC
ATCGTGGACG AGGTATACGG CACCCAGATT AACCCCGATG CTGTTCTGGC CAAGGTGGAG
TCTGCCATCG TCACGCTGGA CGAAACCTGT GAAGTGACCG AAGACGACCT GATTAAGCCC
CAGGTGCTCG CCACCGATGA AACGCTGGTC GCCAACTGCC AGGCGGCAAA CGACATCGTC
GCCTGCGATG CGCTGCTCGT TTCGGACGTG ACCGGCGCCG AAATCACCCG CGTCAACGCC
GACGTGGTCA GCCAGTGGGT GGTCTTCGAC GAAAGCGGCG TGCCGTCGCT TGACGAAGCA
GCCATGACCG AGTGGGCATC GGGTCTTGCT GACGGCATGA GCACCATCGG CACCGAGCGC
ACCTACGAAC GCCCCGACGG GAAGACCGTT ACGGTGTCGG GCGGCGATTA CGGCTGGAGC
ATCTCTTCCG ACGCTATCGT CGAGGCCGTA ACCGATTCCG TCCTGAATCA CGTGAGCGGC
GAGGTGGACA TCGAAGCCAC CAGCTCGGGC AACGGCTATG TATCCGAGAA TCGCGACTGG
GGCTCCTGGG TGGATGTGGA CTTAAGCGAG CAGCACGCCT ACCTGTATGA CGCATCGGGC
AACCTGCTGT GGGATTCGCC TATCATCACA GGCAAGACAG ACGGCCACCA AACGCCGACG
GGCGTGTACT ACCTGAAGGC CCATCAGACC AATGTCGTTC TGAAGGGCCA GATCGACCCG
GAGACGAATG AACCGGAATA CGAGTCGCAC GTGGAGTACT GGATGCCCTT CATCGGCAAC
GCCGTGGGCA TGCACGATGC GCCATGGCAA TCCGACGCGG CGTTCGCCGA TCCCAACGCG
TACACCTACC GGGGATCCCA CGGATGCGTG AACCTGCCGC CCTCGAAGGC AGAGGCGCTG
TTCGGCCTCA TCGACGTGGG GATTTGCGTC GTCTCTCATT ACTAG
 
Protein sequence
MKHANVEEPA EDFAAVNPAG IQGSIAGYSR DSYAGRTSQK NGKGGRVALI TFGIFAAIAG 
AAYGAGAYYF GNHFYPNTTM GPLDLSLATH EEVISQIEDV ESYYSINVKG EGIDFNITSA
DGGIDLDAES VVKAAADTVD KWKWPVQVMD DHDLTEVLVA SSSGDVLSGY VAEQVATFNE
PQTVSEDAYI TYKDAEDAFV IVDEVYGTQI NPDAVLAKVE SAIVTLDETC EVTEDDLIKP
QVLATDETLV ANCQAANDIV ACDALLVSDV TGAEITRVNA DVVSQWVVFD ESGVPSLDEA
AMTEWASGLA DGMSTIGTER TYERPDGKTV TVSGGDYGWS ISSDAIVEAV TDSVLNHVSG
EVDIEATSSG NGYVSENRDW GSWVDVDLSE QHAYLYDASG NLLWDSPIIT GKTDGHQTPT
GVYYLKAHQT NVVLKGQIDP ETNEPEYESH VEYWMPFIGN AVGMHDAPWQ SDAAFADPNA
YTYRGSHGCV NLPPSKAEAL FGLIDVGICV VSHY