Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09580 |
Symbol | |
ID | 8394849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1099538 |
End bp | 1101082 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985717 |
Product | Ykud domain-containing protein |
Protein accession | YP_003143345 |
Protein GI | 257063673 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00711473 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATG CTAACGTAGA GGAGCCGGCT GAGGACTTCG CAGCCGTCAA TCCTGCGGGC ATCCAGGGCT CGATTGCTGG TTATTCGCGC GATTCCTACG CGGGTAGGAC TTCGCAGAAA AATGGCAAGG GTGGCCGTGT TGCCCTGATC ACATTTGGAA TATTCGCCGC TATCGCAGGG GCTGCGTATG GTGCCGGCGC ATATTATTTC GGCAACCATT TCTACCCGAA CACCACCATG GGTCCGCTGG ATCTGTCTCT GGCCACCCAT GAAGAGGTCA TCTCCCAAAT CGAGGATGTC GAATCCTACT ATTCCATCAA CGTGAAGGGC GAAGGCATCG ACTTCAACAT CACGTCCGCT GACGGCGGCA TCGATTTGGA CGCGGAAAGC GTGGTTAAGG CCGCTGCCGA TACGGTCGAT AAATGGAAGT GGCCCGTCCA GGTCATGGAT GACCACGACC TGACCGAAGT GCTGGTGGCT TCTTCCTCAG GCGACGTGCT GAGCGGATAC GTGGCCGAAC AGGTGGCCAC GTTCAACGAG CCGCAGACGG TTTCCGAGGA CGCGTACATC ACGTACAAAG ACGCCGAAGA CGCCTTCGTC ATCGTGGACG AGGTATACGG CACCCAGATT AACCCCGATG CTGTTCTGGC CAAGGTGGAG TCTGCCATCG TCACGCTGGA CGAAACCTGT GAAGTGACCG AAGACGACCT GATTAAGCCC CAGGTGCTCG CCACCGATGA AACGCTGGTC GCCAACTGCC AGGCGGCAAA CGACATCGTC GCCTGCGATG CGCTGCTCGT TTCGGACGTG ACCGGCGCCG AAATCACCCG CGTCAACGCC GACGTGGTCA GCCAGTGGGT GGTCTTCGAC GAAAGCGGCG TGCCGTCGCT TGACGAAGCA GCCATGACCG AGTGGGCATC GGGTCTTGCT GACGGCATGA GCACCATCGG CACCGAGCGC ACCTACGAAC GCCCCGACGG GAAGACCGTT ACGGTGTCGG GCGGCGATTA CGGCTGGAGC ATCTCTTCCG ACGCTATCGT CGAGGCCGTA ACCGATTCCG TCCTGAATCA CGTGAGCGGC GAGGTGGACA TCGAAGCCAC CAGCTCGGGC AACGGCTATG TATCCGAGAA TCGCGACTGG GGCTCCTGGG TGGATGTGGA CTTAAGCGAG CAGCACGCCT ACCTGTATGA CGCATCGGGC AACCTGCTGT GGGATTCGCC TATCATCACA GGCAAGACAG ACGGCCACCA AACGCCGACG GGCGTGTACT ACCTGAAGGC CCATCAGACC AATGTCGTTC TGAAGGGCCA GATCGACCCG GAGACGAATG AACCGGAATA CGAGTCGCAC GTGGAGTACT GGATGCCCTT CATCGGCAAC GCCGTGGGCA TGCACGATGC GCCATGGCAA TCCGACGCGG CGTTCGCCGA TCCCAACGCG TACACCTACC GGGGATCCCA CGGATGCGTG AACCTGCCGC CCTCGAAGGC AGAGGCGCTG TTCGGCCTCA TCGACGTGGG GATTTGCGTC GTCTCTCATT ACTAG
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Protein sequence | MKHANVEEPA EDFAAVNPAG IQGSIAGYSR DSYAGRTSQK NGKGGRVALI TFGIFAAIAG AAYGAGAYYF GNHFYPNTTM GPLDLSLATH EEVISQIEDV ESYYSINVKG EGIDFNITSA DGGIDLDAES VVKAAADTVD KWKWPVQVMD DHDLTEVLVA SSSGDVLSGY VAEQVATFNE PQTVSEDAYI TYKDAEDAFV IVDEVYGTQI NPDAVLAKVE SAIVTLDETC EVTEDDLIKP QVLATDETLV ANCQAANDIV ACDALLVSDV TGAEITRVNA DVVSQWVVFD ESGVPSLDEA AMTEWASGLA DGMSTIGTER TYERPDGKTV TVSGGDYGWS ISSDAIVEAV TDSVLNHVSG EVDIEATSSG NGYVSENRDW GSWVDVDLSE QHAYLYDASG NLLWDSPIIT GKTDGHQTPT GVYYLKAHQT NVVLKGQIDP ETNEPEYESH VEYWMPFIGN AVGMHDAPWQ SDAAFADPNA YTYRGSHGCV NLPPSKAEAL FGLIDVGICV VSHY
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