Gene Shel_09560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09560 
Symbol 
ID8394847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1099175 
End bp1099333 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content55% 
IMG OID644985715 
Productrubredoxin 
Protein accessionYP_003143343 
Protein GI257063671 
COG category[C] Energy production and conversion 
COG ID[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00690016 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACA TCTGCGTTTG CGGCTGGATC TACGATCCCG AAATCGGCGA TCCTGACAAC 
GGCATTGCTC CAGGAACCGC CTTCGAGGAC CTGCCCGAGG ATTGGGTTTG TCCCGAATGC
GGCTTGGACA AGGACAATTT CGAGCCGTAC GAGGAATAA
 
Protein sequence
MKYICVCGWI YDPEIGDPDN GIAPGTAFED LPEDWVCPEC GLDKDNFEPY EE