| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09450 |
|---|
| Symbol | |
|---|
| ID | 8394836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1090675 |
|---|
| End bp | 1091721 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644985704 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003143334 |
|---|
| Protein GI | 257063662 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.513646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.860642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCGTCG TGTTATGCGC CCTTGTCCTA TTGCTGGGTG CATGGCAGGG CTTTTGCGCA
TTTATATACA ACGAGAACAT CAATCAACGG TTTGAAAGCT ACGAGCCGCT AGAGCTGCGT
GTTGAAGACT TCGATGGACT GCAGTGCACG GAGTACAAGT TCCCCTCTGA CAAGGGACAA
ATGCTTGCTG GGTACTTATA CAGTGCAAGC AGCGATCCGC GCGGAATCAT TATCATCGCC
CACGGGTACG GGGGCGGCCA CAACTCGTAT ATGGACTGCG CAAACTACTT TGCACAGCAC
GGGTATTACG TGTTTGCCTA CGATGCCACC GGAAACGATG CCAGCGAAGG CGATGGCGTA
GGCGGCTTCC CGCAAGGAGT AGTCGACCTC GATTATGCCA TTTCGTTTGT GGAGGAGAGC
GGGAACTTCC CCGATCTGCC GATAGGATTG TTCGGGCACA GTTGGGGCGG CTACAGTGTA
TGCAGCGTGC TTACCTACCA TCCCGAGGTG AAAGCCGTCA TCGAGTGCTG TGGGTGCAAT
CGCGCCTCGG ATCTGTTTGA AGTGGGCGGC AGAGCGGAGG TGGGCGACGG AATCGAAGCC
ATGATGCCAT TTGTGAGAAG TTACGAATGG TTCAAATACG GAAACTACGC AACCAATACA
GCAATGGATG GATTCGAGGC AAGTGAAGCA GCGGTGATGG TTGCGCACAG CGAAGACGAT
GATGTGGTGC CTATGAGCTA CGGCTATAAC CTGTATTACG GGAAATACAA GGACGACCCA
CGGTTCACCT TCCTGCATTT CGAGGACAAG GGACATAGTG ACTTTTTCAT TGATGGTAAT
GACACTTATA AGGATGAGTT CGACGCCGAG TTTGACAAAT GGTTCGAAAC GCTTGGATAC
GACCGCGAAG CTGATGAAAA CAAGGAACGG TTTGCAAAGG ACAGAGCTGA ATACATAAAT
ACCCACCTCG ATAGAGTAAG GTGGAGCAAT CGGCTGGATA AAGAACTCTT CGATCAGTTC
TTGGACTTTT ACGATAGGAA CATGTAG
|
|---|
| Protein sequence | MIVVLCALVL LLGAWQGFCA FIYNENINQR FESYEPLELR VEDFDGLQCT EYKFPSDKGQ
MLAGYLYSAS SDPRGIIIIA HGYGGGHNSY MDCANYFAQH GYYVFAYDAT GNDASEGDGV
GGFPQGVVDL DYAISFVEES GNFPDLPIGL FGHSWGGYSV CSVLTYHPEV KAVIECCGCN
RASDLFEVGG RAEVGDGIEA MMPFVRSYEW FKYGNYATNT AMDGFEASEA AVMVAHSEDD
DVVPMSYGYN LYYGKYKDDP RFTFLHFEDK GHSDFFIDGN DTYKDEFDAE FDKWFETLGY
DREADENKER FAKDRAEYIN THLDRVRWSN RLDKELFDQF LDFYDRNM
|
|---|
| |