| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09330 |
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| Symbol | |
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| ID | 8394824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1076283 |
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| End bp | 1077605 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985692 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003143323 |
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| Protein GI | 257063651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000513104 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.568099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCAG CTCAACAAGC GAAGAAGTAC CTTCTCGCTA TCGCCACGAC GTACATGTGC
TACCTGACCC ATGGCGTCCA GGCAATCATT CTTAGCCAGA ACAAGGTCAA TTTCGCCACT
CAGTGGGGAT TTGACATGTC TGACCCCAAC TCCGCAGCCT TCGCCGCTGG CGCCGCTGCC
GTGTCTTTGG CCATCACCTG GACCGGCGTC GGCAAGTTCG TCAGCGTCTG GATCGGCGGC
GAGATTTCCG ACCGCATCGG CCGTAAGATC CCCGCTGTCC TCGGTGGCGT CCTGTACATC
ATCTGCTTCG TGATCTTCCT GGTCACCAAC AGCGCTACCG TCGCTTGCGT CGCAGGCTTC
CTGTCCGGCG TTGCTACGTC TGGCTTCTGG GATGGCGCTC TGTACCCGGC AATCGCCGAG
GCTTCGCCGA AGTATGCAGG CTCCACCACC ATCGGCATCA AGGCCGTCAT CTCCGTGTCC
GGTATCGTGT ACCCGCTGTT CGCCGCTATG AACTCCGGCG CCAACTGGCA CATCAACATC
TGGATCCCCA TCGTCATGTC CGTCATCGCC ACCGTGCTGG CCATCATCAC CCCGTTCGTG
TATGACGACG AGCGCAAGCA GGGTGTCGAG AAGGATACCG CCGGCGCCAA GAACGCTGCC
GAAGCTGAAA TCCAGGCTGC TAGGGACGCC ATGCTGCGTA AGCCCAACGG CCTCGAGAAC
TTCGTCACCC TGTTCTTCGG CTTCATCATC ATGTTCATCA TGTACGGCGC ACAGCAGTAC
TCCAAGGCCT TCGGCATCAA CAACCTCGGC CTGTCCGACG TTGCCGCTGC AGGCATGACC
TCCATCTACA CCGCCGGTTC CATCATCGCC GTCCTCTTCT GGGCATTCAT GATGGGCAAG
CTCCGCTGGA GCCCGATCAA GGTCATCCTG ATCGACTCCA TCATCGCCAC CGTCGCTCTG
GCCATGGTCA TCCTGGCCCT GCCTCTCGGC CTCGGTGCCG GCGTCGTCTA CATCGCCATC
GCCCTGCTCG GCTTCGGCGC TGCTGGCGGC ATGCTCCAGA CTGGCGTCAC CCTGCGTCAG
ACGGTTTGCC CCGGTCCTCG CGGTCGTAAC GTCGGTATGT ACTACACCTT CATGGGCTTC
GCCTCCGTCT TCCTGCCCTT CATCGTCGGC AGCATGACCT CTGCCGTGGG TGAAACCCAG
GCCGTCTGGG TCATGATGAT CCTGCTGCTC GTCGCAGCCC TGATCTCCTG CGCCATGAGC
GCCTACCTGG TGGCTGCTTG GAAGGGTCTG TTCGGCAAGA GCGCAATGGC TCCTCAGGAC
TAA
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| Protein sequence | MSAAQQAKKY LLAIATTYMC YLTHGVQAII LSQNKVNFAT QWGFDMSDPN SAAFAAGAAA
VSLAITWTGV GKFVSVWIGG EISDRIGRKI PAVLGGVLYI ICFVIFLVTN SATVACVAGF
LSGVATSGFW DGALYPAIAE ASPKYAGSTT IGIKAVISVS GIVYPLFAAM NSGANWHINI
WIPIVMSVIA TVLAIITPFV YDDERKQGVE KDTAGAKNAA EAEIQAARDA MLRKPNGLEN
FVTLFFGFII MFIMYGAQQY SKAFGINNLG LSDVAAAGMT SIYTAGSIIA VLFWAFMMGK
LRWSPIKVIL IDSIIATVAL AMVILALPLG LGAGVVYIAI ALLGFGAAGG MLQTGVTLRQ
TVCPGPRGRN VGMYYTFMGF ASVFLPFIVG SMTSAVGETQ AVWVMMILLL VAALISCAMS
AYLVAAWKGL FGKSAMAPQD
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