Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09250 |
Symbol | |
ID | 8394816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1066572 |
End bp | 1067900 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985684 |
Product | flavin-dependent dehydrogenase |
Protein accession | YP_003143315 |
Protein GI | 257063643 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.696714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TTGAGCCTGA TTTCGATGCG ATCGTCGTCG GCGCAGGCCT AGCCGGCTCC GTGGCCGCAT ACGAACTCGC GAAGGCGGGC AAATCCGTCC TCGTCGTAGA ACGCGGCAAC TTTGCAGGCG CCAAAAACAT GACCGGCGGG CGCATCTACG CCCACTCGCT GCACAGCGTG TTCCCGGACA TGGACTTCTC GGAGCTTCCA TTCGAGCGCA AGGTTTCGCA TGAGCGCATC TCGCTGATGG CTCCGGATTC CAACTTCACC ATCGACTTCA CCTCCGAGGA CCTGACCAAG GATGGTCAGG AGTCCTACAC CATCCTGCGC GCCGTGTTCG ACCCGTGGTT GGCCGAGCAG GCTGAGAACG AAGGTGCCGA AATCATCTGC GGCATTCCCG TGGAAGACCT CCTCAAGGAC GAGGACGGCT CCGTCACCGG CACTGCTGGC AAAATCTACG GCGTGCGTGC GGGCGAAGAC GAAATGACCG CATCCGTGGT CATCCTCGCA GATGGCGTCA ACTCCCTGCT GACCGAGAAG GCCGTCGGCT ACAAGCGCCC CGAAGCCAAG TTCATGGCTG TCGGCGTCAA AGAGGTCTAC GAGCTTTCCG AGCAGCGCAT CAACGACCTG TTCCAGGTTG CTGACGGCGA AGGTGCTGCA TGGCTGTTTG CTGGCGATGT CACCCATGGC CTGTTCGGCG GCGGCATCAT CTACACCAAC AAGGATTCCA TCTCCATCGG CATCGTCGCA GGCATCGAAG CCATCGCGAA CGGCGCCACG CGTCCTGTTT ACCAGATGCT CGAGGATCTG AAGGCCCATC CGGCCGTGGC TCCTGTCCTG AAGGACGCCA AGATGGTAGA GCACTCCGGC CACATGGTTC CCGAAGGCGG CATCAACATG ATGCCCGAGC TGACCGGCGA CGGCGTCATC GTCGCTGGCG ACGCGGCCAT GATGTGTGTC AACCTGGGCT ACACCGTGCG CGGCATGGAC TACGCCGTGG CCGCCGGCCA GTACGCCGGC CAGGCCGCTG TGGAGGCCCT TGATGCTGGC GACACGTCCA AGAGCGGCCT TGCCGGTTAT GTGAACCGCC TGAACAACTC CTTCGTCCTG AAGGACCTCA ACCAGTTCAA GCTGGTCCCC GGATTCATGG AGGGCTTCGA CCGCATGTTC TGCGGCTATC CCGAGATGAT TCGCGACATG ATGAACAAGA TGTTCGTCAT TGATGGAACG CCTGTTCAGC CCATGAAGAA GACCATGATG CCTATCGTGA AGGAAGTGGG CTTCATGAAC CTCTTCAAGG ATGTGAGAGG AGCAATGAAG GCCCTATGA
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Protein sequence | MADFEPDFDA IVVGAGLAGS VAAYELAKAG KSVLVVERGN FAGAKNMTGG RIYAHSLHSV FPDMDFSELP FERKVSHERI SLMAPDSNFT IDFTSEDLTK DGQESYTILR AVFDPWLAEQ AENEGAEIIC GIPVEDLLKD EDGSVTGTAG KIYGVRAGED EMTASVVILA DGVNSLLTEK AVGYKRPEAK FMAVGVKEVY ELSEQRINDL FQVADGEGAA WLFAGDVTHG LFGGGIIYTN KDSISIGIVA GIEAIANGAT RPVYQMLEDL KAHPAVAPVL KDAKMVEHSG HMVPEGGINM MPELTGDGVI VAGDAAMMCV NLGYTVRGMD YAVAAGQYAG QAAVEALDAG DTSKSGLAGY VNRLNNSFVL KDLNQFKLVP GFMEGFDRMF CGYPEMIRDM MNKMFVIDGT PVQPMKKTMM PIVKEVGFMN LFKDVRGAMK AL
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