Gene Shel_09250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09250 
Symbol 
ID8394816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1066572 
End bp1067900 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content60% 
IMG OID644985684 
Productflavin-dependent dehydrogenase 
Protein accessionYP_003143315 
Protein GI257063643 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.696714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TTGAGCCTGA TTTCGATGCG ATCGTCGTCG GCGCAGGCCT AGCCGGCTCC 
GTGGCCGCAT ACGAACTCGC GAAGGCGGGC AAATCCGTCC TCGTCGTAGA ACGCGGCAAC
TTTGCAGGCG CCAAAAACAT GACCGGCGGG CGCATCTACG CCCACTCGCT GCACAGCGTG
TTCCCGGACA TGGACTTCTC GGAGCTTCCA TTCGAGCGCA AGGTTTCGCA TGAGCGCATC
TCGCTGATGG CTCCGGATTC CAACTTCACC ATCGACTTCA CCTCCGAGGA CCTGACCAAG
GATGGTCAGG AGTCCTACAC CATCCTGCGC GCCGTGTTCG ACCCGTGGTT GGCCGAGCAG
GCTGAGAACG AAGGTGCCGA AATCATCTGC GGCATTCCCG TGGAAGACCT CCTCAAGGAC
GAGGACGGCT CCGTCACCGG CACTGCTGGC AAAATCTACG GCGTGCGTGC GGGCGAAGAC
GAAATGACCG CATCCGTGGT CATCCTCGCA GATGGCGTCA ACTCCCTGCT GACCGAGAAG
GCCGTCGGCT ACAAGCGCCC CGAAGCCAAG TTCATGGCTG TCGGCGTCAA AGAGGTCTAC
GAGCTTTCCG AGCAGCGCAT CAACGACCTG TTCCAGGTTG CTGACGGCGA AGGTGCTGCA
TGGCTGTTTG CTGGCGATGT CACCCATGGC CTGTTCGGCG GCGGCATCAT CTACACCAAC
AAGGATTCCA TCTCCATCGG CATCGTCGCA GGCATCGAAG CCATCGCGAA CGGCGCCACG
CGTCCTGTTT ACCAGATGCT CGAGGATCTG AAGGCCCATC CGGCCGTGGC TCCTGTCCTG
AAGGACGCCA AGATGGTAGA GCACTCCGGC CACATGGTTC CCGAAGGCGG CATCAACATG
ATGCCCGAGC TGACCGGCGA CGGCGTCATC GTCGCTGGCG ACGCGGCCAT GATGTGTGTC
AACCTGGGCT ACACCGTGCG CGGCATGGAC TACGCCGTGG CCGCCGGCCA GTACGCCGGC
CAGGCCGCTG TGGAGGCCCT TGATGCTGGC GACACGTCCA AGAGCGGCCT TGCCGGTTAT
GTGAACCGCC TGAACAACTC CTTCGTCCTG AAGGACCTCA ACCAGTTCAA GCTGGTCCCC
GGATTCATGG AGGGCTTCGA CCGCATGTTC TGCGGCTATC CCGAGATGAT TCGCGACATG
ATGAACAAGA TGTTCGTCAT TGATGGAACG CCTGTTCAGC CCATGAAGAA GACCATGATG
CCTATCGTGA AGGAAGTGGG CTTCATGAAC CTCTTCAAGG ATGTGAGAGG AGCAATGAAG
GCCCTATGA
 
Protein sequence
MADFEPDFDA IVVGAGLAGS VAAYELAKAG KSVLVVERGN FAGAKNMTGG RIYAHSLHSV 
FPDMDFSELP FERKVSHERI SLMAPDSNFT IDFTSEDLTK DGQESYTILR AVFDPWLAEQ
AENEGAEIIC GIPVEDLLKD EDGSVTGTAG KIYGVRAGED EMTASVVILA DGVNSLLTEK
AVGYKRPEAK FMAVGVKEVY ELSEQRINDL FQVADGEGAA WLFAGDVTHG LFGGGIIYTN
KDSISIGIVA GIEAIANGAT RPVYQMLEDL KAHPAVAPVL KDAKMVEHSG HMVPEGGINM
MPELTGDGVI VAGDAAMMCV NLGYTVRGMD YAVAAGQYAG QAAVEALDAG DTSKSGLAGY
VNRLNNSFVL KDLNQFKLVP GFMEGFDRMF CGYPEMIRDM MNKMFVIDGT PVQPMKKTMM
PIVKEVGFMN LFKDVRGAMK AL