Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09110 |
Symbol | |
ID | 8394802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1054969 |
End bp | 1055892 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985670 |
Product | glutamate racemase |
Protein accession | YP_003143304 |
Protein GI | 257063632 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.644138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0830373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCAT GCATGAACAT GACTTCCGCA TCAAACATAC GCTATGGTTC GCAGTCGTGG GACAATGCGC CCATCGGCGT GTTCGACTCC GGCTACGGCG GGCTGACCTG CGCCCGCGAG ATTGCAGAGC TCATGCCCAA CGAATCCATC GTCTACTTCG GCGACACGGC GCGCTGCCCC TACGGTCCGC GCGACCAGGC CGAGGTCGAC TTGTTCGTCC AGCAGATCGG CGCCTGGCTT ATGGACAAAG GCGTGAAGAT GCTGGTCATA GCCTGCAACA CGGCCACAGC CGCAGGTCTT GAGCACGCCC AACAGACGTT TTCGGTTCCC ATCCTGGGAG CCGTGGAACC CGGAGCCCGC GCCGCCGCCC GCACCACGAA GAACCGCAAG GTGGGCGTCA TCGGCACGAA GGGCACCATC GAAAGCGGCT GCTACCCGCG GGCCATCCGC AACATCGATG CCGGCATCAC GGTGTTCAGC ACCGCCACGC CTCGGTTCGT GGAGATCGTC GAGAACGGCA TCCGTCTGGC CAAAGGCCCC TTCGAGGATT TGACCAGCTC TGTGTCGAAG GTCTATATCC GCCCGGAATT CCGCACCATC GCCATCGAGT ACCTGGAGCC TTTGCGCCGT TGCGAAATCG ATACGCTGGT GCTGGCATGC ACGCATTACC CCATGCTGAA AGCCCTGATC GGCGGTGTCA TCGGCACGAA TGTGCGGCTG GTTTCGTCGG CCGAAGAGCT GGCCAAGGAC GTGCACGACG TGCTGTCTAT GCGCGGGCAG CTGGCCGATC CCAACCATGT AGGGGAGCAC CGCTTCTTCA CCACGTCGAC CGATGTGGAC GAGTTCCAGG CCTTCGGGTC CCGCGTGTTC AACCGTCAGA TCGAACGGCC TTCCTACGTT TCCCTCTCCG AGCTGGAAGG GTAG
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Protein sequence | MLACMNMTSA SNIRYGSQSW DNAPIGVFDS GYGGLTCARE IAELMPNESI VYFGDTARCP YGPRDQAEVD LFVQQIGAWL MDKGVKMLVI ACNTATAAGL EHAQQTFSVP ILGAVEPGAR AAARTTKNRK VGVIGTKGTI ESGCYPRAIR NIDAGITVFS TATPRFVEIV ENGIRLAKGP FEDLTSSVSK VYIRPEFRTI AIEYLEPLRR CEIDTLVLAC THYPMLKALI GGVIGTNVRL VSSAEELAKD VHDVLSMRGQ LADPNHVGEH RFFTTSTDVD EFQAFGSRVF NRQIERPSYV SLSELEG
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