Gene Shel_09110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09110 
Symbol 
ID8394802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1054969 
End bp1055892 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID644985670 
Productglutamate racemase 
Protein accessionYP_003143304 
Protein GI257063632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.644138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0830373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAT GCATGAACAT GACTTCCGCA TCAAACATAC GCTATGGTTC GCAGTCGTGG 
GACAATGCGC CCATCGGCGT GTTCGACTCC GGCTACGGCG GGCTGACCTG CGCCCGCGAG
ATTGCAGAGC TCATGCCCAA CGAATCCATC GTCTACTTCG GCGACACGGC GCGCTGCCCC
TACGGTCCGC GCGACCAGGC CGAGGTCGAC TTGTTCGTCC AGCAGATCGG CGCCTGGCTT
ATGGACAAAG GCGTGAAGAT GCTGGTCATA GCCTGCAACA CGGCCACAGC CGCAGGTCTT
GAGCACGCCC AACAGACGTT TTCGGTTCCC ATCCTGGGAG CCGTGGAACC CGGAGCCCGC
GCCGCCGCCC GCACCACGAA GAACCGCAAG GTGGGCGTCA TCGGCACGAA GGGCACCATC
GAAAGCGGCT GCTACCCGCG GGCCATCCGC AACATCGATG CCGGCATCAC GGTGTTCAGC
ACCGCCACGC CTCGGTTCGT GGAGATCGTC GAGAACGGCA TCCGTCTGGC CAAAGGCCCC
TTCGAGGATT TGACCAGCTC TGTGTCGAAG GTCTATATCC GCCCGGAATT CCGCACCATC
GCCATCGAGT ACCTGGAGCC TTTGCGCCGT TGCGAAATCG ATACGCTGGT GCTGGCATGC
ACGCATTACC CCATGCTGAA AGCCCTGATC GGCGGTGTCA TCGGCACGAA TGTGCGGCTG
GTTTCGTCGG CCGAAGAGCT GGCCAAGGAC GTGCACGACG TGCTGTCTAT GCGCGGGCAG
CTGGCCGATC CCAACCATGT AGGGGAGCAC CGCTTCTTCA CCACGTCGAC CGATGTGGAC
GAGTTCCAGG CCTTCGGGTC CCGCGTGTTC AACCGTCAGA TCGAACGGCC TTCCTACGTT
TCCCTCTCCG AGCTGGAAGG GTAG
 
Protein sequence
MLACMNMTSA SNIRYGSQSW DNAPIGVFDS GYGGLTCARE IAELMPNESI VYFGDTARCP 
YGPRDQAEVD LFVQQIGAWL MDKGVKMLVI ACNTATAAGL EHAQQTFSVP ILGAVEPGAR
AAARTTKNRK VGVIGTKGTI ESGCYPRAIR NIDAGITVFS TATPRFVEIV ENGIRLAKGP
FEDLTSSVSK VYIRPEFRTI AIEYLEPLRR CEIDTLVLAC THYPMLKALI GGVIGTNVRL
VSSAEELAKD VHDVLSMRGQ LADPNHVGEH RFFTTSTDVD EFQAFGSRVF NRQIERPSYV
SLSELEG