| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09100 |
|---|
| Symbol | |
|---|
| ID | 8394801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1054255 |
|---|
| End bp | 1054722 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644985669 |
|---|
| Product | SsrA-binding protein |
|---|
| Protein accession | YP_003143303 |
|---|
| Protein GI | 257063631 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0691] tmRNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.971292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0787138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCAGG ACAAGAAACA GATCGCCAAA AACCGCCGTG CGTTGCACGA TTACGAGATC
GTCGAGACCT TCGAGGCCGG CATCGTGCTG ACGGGCACCG AGGTTCGTTC GCTGCGTGAG
AACAACTGCC AGCTCACGGA CTGCTACGCG TTGGTCCGCC ATGGCGAAGT ATGGCTGCAC
GGTCTGCACA TCGCGCCGTA TTCCAACGGC AGCTACTTCA ACGTCGATCC CGACCGCAAG
CGCAAACTGC TGCTTCATCG CAGGCAGATT CGCTATTTGG ACTCCAAGGC CAAAGAGAAA
GGCCTCGCAC TGGTTCCGCT CAACATCTAT TTTTCGCCGA ACGGCCTGGT CAAGGTCGAG
CTTGCAGTCG CCCGCGGCAA GAAGCTGCAC GACAAGCGAG CCAGCATGGC AGAACGCGAT
ACAAAACGGG AAATCGAGCG TGCCCTGAAG TCACGCAACC GTTATTAG
|
|---|
| Protein sequence | MAQDKKQIAK NRRALHDYEI VETFEAGIVL TGTEVRSLRE NNCQLTDCYA LVRHGEVWLH
GLHIAPYSNG SYFNVDPDRK RKLLLHRRQI RYLDSKAKEK GLALVPLNIY FSPNGLVKVE
LAVARGKKLH DKRASMAERD TKREIERALK SRNRY
|
|---|
| |