Gene Shel_08900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08900 
Symbol 
ID8394781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1032352 
End bp1033194 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID644985650 
Producthypothetical protein 
Protein accessionYP_003143286 
Protein GI257063614 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000429341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000162574 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGCATGC CTGATCGCAT ACCGCCGTCG ACCCTCGAAC TGCCCTATCC GAGCATGTCC 
GAGGGTCGAC GTGTGTCTAT TTCCTTTTAT ACCGACGAGG CCCTGTTCGA AGCCTGTGGC
GTTCGCATGG CGTTCACCGA GCGTTTCGGG GGTGTAAGCG AAGGGCCTTA TGAATCGCTT
GACCTGGGCA CGGCCGCCGC GGGGCTCTGC GATGCGCCTG AGCGAACGGC CGAGAACCGC
TCCGTTGCCG CGCGTGCGTT GGGTGCCCAG GGCATGCCCC TCATCGTGCC GAACCAAGTC
CATAAAGACA CGGTTGTCGT CTGCGGCGAT ATCAGCGAGG TGTCGGACGT GCAGAAGGCG
GCAGACGGTG GCGCCGATGC CGTCGTCGTG ACGTGTTCCG GTGTGGCGGC AATGCTTCGC
TTCGCGGATT GCGTCCCGGT CGTCGTGGTC TCTCCAACAG GGGCGTTCGC CGTCGTGCAC
GCAGGTTGGC GAGGCGTCGT GGCCCGCATC GTCGAAAAGG CAATCTGTTC CCTTGCCGAA
AAGGATGGAG CGTCCGTTTT CTCGTACAAT GCATATATCG GACCGCATAT ACGCCCTTGC
TGCTTCCAGG TGGGGGAGGA TGTAGCCCTT ACGTTCTCCC GCGAATTCGG TGCCGAGGTT
GTGGGAGACG ACCGCCACGT GGATATGGTC GCGGCCCTCA CCCAAAGCAT GACGCGCGTA
GGGATGAACC CCGACCGCAT CGCCGATTTG GGCGTCTGCA CGGTTGAGGA CGAGAGGTTC
TTCTCGTACC GCCGCTCGGG TGGAGATTGC GGCCGCCACG GAGCCATGGC GTTCCGGATT
TAG
 
Protein sequence
MRMPDRIPPS TLELPYPSMS EGRRVSISFY TDEALFEACG VRMAFTERFG GVSEGPYESL 
DLGTAAAGLC DAPERTAENR SVAARALGAQ GMPLIVPNQV HKDTVVVCGD ISEVSDVQKA
ADGGADAVVV TCSGVAAMLR FADCVPVVVV SPTGAFAVVH AGWRGVVARI VEKAICSLAE
KDGASVFSYN AYIGPHIRPC CFQVGEDVAL TFSREFGAEV VGDDRHVDMV AALTQSMTRV
GMNPDRIADL GVCTVEDERF FSYRRSGGDC GRHGAMAFRI