Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08900 |
Symbol | |
ID | 8394781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1032352 |
End bp | 1033194 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985650 |
Product | hypothetical protein |
Protein accession | YP_003143286 |
Protein GI | 257063614 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000429341 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000162574 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGCGCATGC CTGATCGCAT ACCGCCGTCG ACCCTCGAAC TGCCCTATCC GAGCATGTCC GAGGGTCGAC GTGTGTCTAT TTCCTTTTAT ACCGACGAGG CCCTGTTCGA AGCCTGTGGC GTTCGCATGG CGTTCACCGA GCGTTTCGGG GGTGTAAGCG AAGGGCCTTA TGAATCGCTT GACCTGGGCA CGGCCGCCGC GGGGCTCTGC GATGCGCCTG AGCGAACGGC CGAGAACCGC TCCGTTGCCG CGCGTGCGTT GGGTGCCCAG GGCATGCCCC TCATCGTGCC GAACCAAGTC CATAAAGACA CGGTTGTCGT CTGCGGCGAT ATCAGCGAGG TGTCGGACGT GCAGAAGGCG GCAGACGGTG GCGCCGATGC CGTCGTCGTG ACGTGTTCCG GTGTGGCGGC AATGCTTCGC TTCGCGGATT GCGTCCCGGT CGTCGTGGTC TCTCCAACAG GGGCGTTCGC CGTCGTGCAC GCAGGTTGGC GAGGCGTCGT GGCCCGCATC GTCGAAAAGG CAATCTGTTC CCTTGCCGAA AAGGATGGAG CGTCCGTTTT CTCGTACAAT GCATATATCG GACCGCATAT ACGCCCTTGC TGCTTCCAGG TGGGGGAGGA TGTAGCCCTT ACGTTCTCCC GCGAATTCGG TGCCGAGGTT GTGGGAGACG ACCGCCACGT GGATATGGTC GCGGCCCTCA CCCAAAGCAT GACGCGCGTA GGGATGAACC CCGACCGCAT CGCCGATTTG GGCGTCTGCA CGGTTGAGGA CGAGAGGTTC TTCTCGTACC GCCGCTCGGG TGGAGATTGC GGCCGCCACG GAGCCATGGC GTTCCGGATT TAG
|
Protein sequence | MRMPDRIPPS TLELPYPSMS EGRRVSISFY TDEALFEACG VRMAFTERFG GVSEGPYESL DLGTAAAGLC DAPERTAENR SVAARALGAQ GMPLIVPNQV HKDTVVVCGD ISEVSDVQKA ADGGADAVVV TCSGVAAMLR FADCVPVVVV SPTGAFAVVH AGWRGVVARI VEKAICSLAE KDGASVFSYN AYIGPHIRPC CFQVGEDVAL TFSREFGAEV VGDDRHVDMV AALTQSMTRV GMNPDRIADL GVCTVEDERF FSYRRSGGDC GRHGAMAFRI
|
| |