| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08860 |
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| Symbol | |
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| ID | 8394777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1027671 |
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| End bp | 1029065 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985646 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_003143282 |
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| Protein GI | 257063610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0311093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000215103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCCGAAC ATACTAAAAC CATCCATTTC GTCGGTGTCG GCGGAGTGGG GATGAGCGGT
ATCGCCCGCA TCGCTGCCGA CTTCGGCATG AAGGTCAGCG GCTCCGATAT GGCTTCTTCC
GCATACACGA AGCAGCTCGA GGACATGGGC ATCAAGGTGT TCGTCGGGCA CGACGCCGCC
AACGTGCCTG AAAACTGCGA TGTGGTTGTG GCGTCGACCG CAATTCCGGA CACCAATCCC
GAAATCGTGG CGGCCCGCGA ACGCGGCATC GAGGTGTGGC AGCGCGCCCA TATGCTGGCC
GAATTGGGAC GCGGCCTGAA AACCCTGGCC GCTGCAGGCA CCCACGGCAA GACCACCACG
TCGTCCATGC TGGCGACCGC CATCGATGCG CTGGGGCTCG ACCCTACCTT CGTCGTCGGC
GGCATGGTGG ATGCGTACAA GACCAACGCT AAATCCGGTA CGGGCGAATA CTACGTGGTC
GAAGCCGACG AATCCGACGG GTCGTTCCTG AACCTGTCGC CGTACGTGGC GCTGGTCACC
AATGTGGAGC CCGACCACCT CGACCATTAC ACCGGCGGCA TCGACGAGAT CCGCGACACG
TTCGCGAAGT TCATGTCCTC GGTGCCTGAC GAAGGCGCCT GCGTGGTGTT CGGCGACGAC
CCCGAGCTGG TTCGCATTGC CCGGGCAAGT GCCAAGCGCG TGTACACCTA CGGCCTTGGC
GAGGGCAACG ACATCGTCGT GTCCGGATAT TCCACCAAGG GCATTTCCAG CACTTTCGAC
CTGAGCATGC CCGACGGCTC CAACGTCACG TGCACGTTGA AGAAGAACCC TGGCCTGCAC
AACGCGCTCA ACGCCGCAGG CATCCTGGGC GTGGTGTTCG CGCTGGGCCT CGATGTGGCC
GCCGCCGCAG AGGGCATCGC CGATTACACG GGCGTCCGTC GCAGGTTCGA CCTGGTGGGT
GAGGCAGCAG GCGTGACCGT TGTCGATGAC TACGCCCATC ACCCCACCGA GATCAAGGCG
ACGTTGTCCG CGGCTGCGGG CTTGGATTTC AAGCGGGTGT TCGCGCTGTT CCAGCCCCAT
CGCTACAGCC GTACGGCTTC TTTGACCGAT GAGTTCGGCA AGGCCTTCGC AGATGCCGAC
GTGCTGCGCA TCATGGACGT CTATCCGGCA GGGGAGGCTC CCATCGAAGG CGTGTCCGGC
AAGCTGATCG CCGACGCGGT CGAGGCCTTC GGCGCTCCGA CCGATGTGGC ATACCTGCCA
GACAAGGACG AGGCTGCGGC GCGCGTGCTT GAGGAGCTTC AGCCGGGCGA CATCCTGTTT
ACCATGGGTG CAGGTGACGT GACCAAGCTG GGTCCCGCCA TCGTCGAAGA GCTCAAGCGC
CGCGAAGAGG CTTAG
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| Protein sequence | MAEHTKTIHF VGVGGVGMSG IARIAADFGM KVSGSDMASS AYTKQLEDMG IKVFVGHDAA
NVPENCDVVV ASTAIPDTNP EIVAARERGI EVWQRAHMLA ELGRGLKTLA AAGTHGKTTT
SSMLATAIDA LGLDPTFVVG GMVDAYKTNA KSGTGEYYVV EADESDGSFL NLSPYVALVT
NVEPDHLDHY TGGIDEIRDT FAKFMSSVPD EGACVVFGDD PELVRIARAS AKRVYTYGLG
EGNDIVVSGY STKGISSTFD LSMPDGSNVT CTLKKNPGLH NALNAAGILG VVFALGLDVA
AAAEGIADYT GVRRRFDLVG EAAGVTVVDD YAHHPTEIKA TLSAAAGLDF KRVFALFQPH
RYSRTASLTD EFGKAFADAD VLRIMDVYPA GEAPIEGVSG KLIADAVEAF GAPTDVAYLP
DKDEAAARVL EELQPGDILF TMGAGDVTKL GPAIVEELKR REEA
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