| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08730 |
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| Symbol | |
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| ID | 8394764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1011702 |
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| End bp | 1013393 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644985633 |
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| Product | uncharacterized membrane protein, putative virulence factor |
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| Protein accession | YP_003143269 |
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| Protein GI | 257063597 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.201008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000366409 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCCGCCG AGCCCGAGCA GGAAACGGGC GTCGGCGAGC AGGTAGGAAA ATCCGCGGCG
ATGATGAGCT TCTTCATCAT CGTGTCGCGC ATCACTGGAT TCGTCCGCAC CTGGGCCATG
GCGTATGCCT TGGGCGCAAC CGTCCTGGCC AGCTCTTACC AGGTGGCCAA CAACCTGCCG
GAGATGCTGT ACGAGATGGT TTTGGCCGGC ATCTTGACCA CGGCGTTCCT GCCGGTCTAC
ATGTCCGTCA AGCAGAAGCT CGGAGCCGAA CGAGGTAACG AGTACGCCAG CAACATCCTA
AGCCTGACCT GCATATTCTT AGGAATCATC GCGCTTCTGT GCGTGCTTTT CGCTCCGCAG
CTCATTTTCA CGCAGAGCTT CTTGAGCGAC CAGAAGAACA TGCACGACGC AGTATTCTTC
TTCAGGTTCT TCTCCATACA AATCCTGTTC TACGGCGTAT CGGCCATCGT CAGCGGCCTG
CTCAACGCAT CCCGCGACTA TATCTGGTAC AGCGCCGCTC CCATCCTGAA CAACGTGGTG
GTCACCGCTA CGTTCGTGTT GTATGCCATG GTGGCGCCCC ATGACCCCCA TCTGGCGAAC
GTCATCCTGG GCATCGGCAA CCCCCTTGGC ATCTTCGTGC AGATGGCCAT TCAGATCCCG
GCCCTGAAAA AGAACGGCAT CAAGCTCAGG TTCCGCATCG ACTTGAAAGA CCCGGCCCTT
ATGGAGACGC TGTCCATCGG CGTGCCCACC ATCATCGCCA CGGCCATCGG CTTCCTCATC
GTGTCCATCA AGAACGCGGC CGCCTACGAC GTGGTCGGAA ACGGTCCGTC CATCATCACG
TACGCGCGCC TGTGGTACAA CCTGCCCTAC GCCTTTTTGA CCGTCCCCAT CACCACGGCG
CTGTTCACGG AGATCTCCGA GATGTTCGCG AAGGACAACA TGGAGGGCTT CAAACGTAGC
ATTGTTTCAG GCACGTCGCA AATCCTGTTC TTCATGGTTC CCTTCGCGCT GTACCTGATC
GTCTTCTCCA TCCCGCTGGT GACGCTTTAC CACATCGGCG CCTTCACCAC CGACAACATC
CTGTCCATCG CGCTGTACTT GGCGGTGTTC TCTATATCGC TTCCACTTTA CGGCGTGCAG
TCCTACATGC AGCGCGTATT TTCGGCGCTG CGTCGCATGA GGGAATACGT TGCCGTCATC
GTCATTGCGG CCGTAGCTCA AATCGCCTTC ACGCTCGTTT TCGGCACGCA CCTCGTATTC
AAGGGCGGCG CTATGGGCAT GGCGGGCATA GCGTTGAGTG AGACCGTGTA TTTCGCCATC
GTCGACGTGC TGTGCTTCGT GCAGCTGCGC AGGCATTTCG GCGCCATCGG CTACCGCAAC
GTCATCAGCA CAGGCGTCAA ATCGCTGGCC ATCGGTCTTG CCGGCGCAGC GGCAGGCGCC
GTCGTTCTGG TGGCGCTGCA TTACCTGTTC GGTGGCGGTG CGCCTGCGCC TGCGGACATC
GGAGGATCCG GTGCTCCGAA TGCGGAAATC ATGCTGGACG GCTCGATTGC GCACGCGTTC
ATCATGATCG TCGTCGGCGG ACTGGTAGCG CTGTTTACAA CCTACGGCCT GGCCATCAAG
TTGAAGATGC CCGAATCCGC CATGATAAGC CGGCTTACCG GAAGAATCAC CGGAAGGCTT
TTCCGCCGCT AG
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| Protein sequence | MSAEPEQETG VGEQVGKSAA MMSFFIIVSR ITGFVRTWAM AYALGATVLA SSYQVANNLP
EMLYEMVLAG ILTTAFLPVY MSVKQKLGAE RGNEYASNIL SLTCIFLGII ALLCVLFAPQ
LIFTQSFLSD QKNMHDAVFF FRFFSIQILF YGVSAIVSGL LNASRDYIWY SAAPILNNVV
VTATFVLYAM VAPHDPHLAN VILGIGNPLG IFVQMAIQIP ALKKNGIKLR FRIDLKDPAL
METLSIGVPT IIATAIGFLI VSIKNAAAYD VVGNGPSIIT YARLWYNLPY AFLTVPITTA
LFTEISEMFA KDNMEGFKRS IVSGTSQILF FMVPFALYLI VFSIPLVTLY HIGAFTTDNI
LSIALYLAVF SISLPLYGVQ SYMQRVFSAL RRMREYVAVI VIAAVAQIAF TLVFGTHLVF
KGGAMGMAGI ALSETVYFAI VDVLCFVQLR RHFGAIGYRN VISTGVKSLA IGLAGAAAGA
VVLVALHYLF GGGAPAPADI GGSGAPNAEI MLDGSIAHAF IMIVVGGLVA LFTTYGLAIK
LKMPESAMIS RLTGRITGRL FRR
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