| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08680 |
|---|
| Symbol | |
|---|
| ID | 8394759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1008482 |
|---|
| End bp | 1008862 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644985628 |
|---|
| Product | preprotein translocase, SecE subunit |
|---|
| Protein accession | YP_003143264 |
|---|
| Protein GI | 257063592 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0690] Preprotein translocase subunit SecE |
|---|
| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000111106 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000182665 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA AGTCTAAAAC ACAGAGGGCC AAGCATTCCG CTGCACGTCA GGCTCGCAAG
GCAGAAGCCG CCTTGCAGGT AACTGACGAG GGCGCTGCTT CCGAGGATTC TGCGAAGGCC
AAGGCTGCGA TCGAAAAGAA GTCGGATAAG AAGGCCGAAG CCAAGAAGGC AGAAACCAAG
AAGCCGAAGA AGGAACGCTT CAAGTTCCTC AAGGACGTGA GTGCTGAAAT GAAGCGCGTC
ACGTGGCCGA GCCGTCCCGA GGTCATTCGT TGGAGTGGCG TCGTGGTCGG TGCTTTGCTG
TTCTTCGGCG TCTTTGTTGC CGTTCTCGAC AACCTGATCG TCACGCCCTT GATCGTCGCT
CTTTCGAATC TGGGGGCGTA A
|
|---|
| Protein sequence | MAKKSKTQRA KHSAARQARK AEAALQVTDE GAASEDSAKA KAAIEKKSDK KAEAKKAETK
KPKKERFKFL KDVSAEMKRV TWPSRPEVIR WSGVVVGALL FFGVFVAVLD NLIVTPLIVA
LSNLGA
|
|---|
| |