Gene Shel_08560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08560 
Symbol 
ID8394747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1000701 
End bp1001489 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID644985616 
Producthypothetical protein 
Protein accessionYP_003143256 
Protein GI257063584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000399194 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAGCG TAACGGGTGT TTATCCAAAA AGCCGGATGG ATGATTACTC ATGGGATGAA 
CTGGCGCGAA TCGCTAGGGT GATGTCTGCC GCTGGTGGCA AGTGGCGGGG AATCGAGGTT
GCGAAAGAGT ACAACTTGTG TACACCGAGC GGCTCGCTTA ATGGTGCTCA GAAAAAGACC
TTGAGGTTAA AAAACGGCCT GTGTACGGAT GCCGTGATTA TCGGTCTTAT GCACGATAAA
CGTGCGTATT CTGACGACCT TGCAGGCATC TCCTTCCAGA CCGTTAATTG CGTAACGTTT
GTTCCCATGA ACAGTTATGG AGGCAATAGG TACGGTTGGC AAGGGTCTGA TTTGAGGCAT
TGGCTCAACT CTGAATTTCT ACGTTTCCTG CCCGACGACT TATCAAGAAG TATCATCCCT
GTCGAAAAAC GGACCAACAA CAAAGGGAAG ACGAATGGTT CAAGTGATGT AACGGAAACG
AATGATCAGA TCTGGGTTCC GTCTCTTGTG GAGCTTGTAG GGCTGCTGGA TAGGGACAGC
TTTCTTGACC ATGCCCGTTT TACTGCAGAC ATCTACAACG CAGAAGGAAA GCAATATGAG
CTATACAAAT ACTACGATGT TGTCTTCGGG GGAGGCTGTA GCGAGATAAG CAAAGAATGG
TGTTGGTGGG AACGGAGTTG CTTGCCGACG TACGACGATC TGTGGTGGGT TGTGAACAAG
ATGGGATTCG TCGACCGGTC GAGGGACCCT GCGTCAAATG GCGGCGTTGC TCCGTGTTTT
TGTTTGTGA
 
Protein sequence
MGSVTGVYPK SRMDDYSWDE LARIARVMSA AGGKWRGIEV AKEYNLCTPS GSLNGAQKKT 
LRLKNGLCTD AVIIGLMHDK RAYSDDLAGI SFQTVNCVTF VPMNSYGGNR YGWQGSDLRH
WLNSEFLRFL PDDLSRSIIP VEKRTNNKGK TNGSSDVTET NDQIWVPSLV ELVGLLDRDS
FLDHARFTAD IYNAEGKQYE LYKYYDVVFG GGCSEISKEW CWWERSCLPT YDDLWWVVNK
MGFVDRSRDP ASNGGVAPCF CL