Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08550 |
Symbol | |
ID | 8394746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 999932 |
End bp | 1000678 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644985615 |
Product | ankyrin repeat-containing protein |
Protein accession | YP_003143255 |
Protein GI | 257063583 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000454701 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATTTCA TCTATGGAGA GAAGGATTCA GCGACGGCCG ATCTTTGTAG CAGGCTGTTT GCAGGGAGGT GTGATCGGTT TCAAATAGAC GCATTTCTGC GTAGTGGGGC AGATCCAAAT GGGCATGTGA TGTATTCGCA AAGTGAAATG CCTGCATACT CGAAACAGAT AATCTCCCCT TTGGGTATCG CTTGTCTGAT GGGGGATTAT GAATGTGCTG CCGCTTTGAT AGAACGAGGG GCTCGGTGCT GGGACTTCCA AGTGGGGTTG GTGGGCGAGG CGGCGAGAGG AGGAAACGCG CGTATTGTTG ACCTGCTCGT GCGAAACGGC GCCAGCGTCG ACGGAGAGAA CGGCTCTTAC CAGAACCCTC CTTTGGTCAG GCTGAGCTGC ACGCCGCTTG ATGATTGGAG GATGGCGGAA TGTCTGCTAA AGCATGGTGC CTACCCTGAC ATTATGGCTC AAAACGGAGT ATTCCCTTTG TATTGTGCCG CCCAGATAGG CAACGTTCAG ATGATGAAGT CTCTACTGGA GTACGGTGCG CGAATCAACA TGACCACGCC AAGGGGCAAT ACTGCATTGA TGAATGCATG CGATGAAGGA GAGACTCAGG CTGTGAAGCT TCTGTTGGAC GAAGGCGCTG ATGCCAGCCT GAGAAATGCC ATGGGTAAGA CATGCATGGA TTTTGCTCGT CAGAACGGTT ATGGCTGGAT TGTACAACTT CTAAATGATT ACGGAGTGCG ATGGTAG
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Protein sequence | MYFIYGEKDS ATADLCSRLF AGRCDRFQID AFLRSGADPN GHVMYSQSEM PAYSKQIISP LGIACLMGDY ECAAALIERG ARCWDFQVGL VGEAARGGNA RIVDLLVRNG ASVDGENGSY QNPPLVRLSC TPLDDWRMAE CLLKHGAYPD IMAQNGVFPL YCAAQIGNVQ MMKSLLEYGA RINMTTPRGN TALMNACDEG ETQAVKLLLD EGADASLRNA MGKTCMDFAR QNGYGWIVQL LNDYGVRW
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