| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08520 |
|---|
| Symbol | |
|---|
| ID | 8394743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 994993 |
|---|
| End bp | 996522 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644985612 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003143252 |
|---|
| Protein GI | 257063580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.865531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0343131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAC GAAAGCCTCT GCCGCCAACC GCTGCAGACG CCGCCCGCGA GGCCCTTCGC
GCCGAGGAGC GCAAACGTGC ATCCGCCGGC AACCCGCTTA AACCCATCGA GGTCCTGAAA
ACCATCATCG CCGCCTATCA GGCCTACGTC TTCGCCACCG AAGGCGCCTC CGCCGACAAC
GGAGCCGTCG CATCCGACGA CAGGCAAGGC CTTGCAAGGG GCACCCAAAG CGCCGTGGAC
CGCATGCTGT TCAACGCGAA TTACTGGCTG GCGGCCTATG AGGATCGCAT CGTCTCGACG
TTTCCCGACG CCTGCGACGC CCGTGCCTGT CTGAAGAGCA TCGCCGTGTG GAACAGCCAC
ACCCTGCGCC TGAACACCCT CGACCCCGAG GACGTCACTG CCACTTTCGG ACGCTTCTGC
CCACCCTTCG CGGTCAACAA CCGCCGCGGC GCCGATGGGA AGAACGGCGG GAAAGGTCCC
GTTCCAGAGT TTCGGACCTG CGCATTGGAG ATTGCCGGAT ACAAGCCCGC CGAACAGGCG
GCGGACATCG TGCGATTGGT TGCCGACGTG GAGGCCGAGG CCCGAATCTA CCAGACCCTC
GAAGGCGGAA ATCCGCTGGA CGCCCTTTTC GACATCCTGC CGGCGTGGTG TCTGCAGGAC
CGCATCCCCA TGGTAGCCGG CGGCTGGTAC GACAATGCCG ACATCATGCT GCTCGTCGTG
TCCGAGCTGG ACGCCTGCTT CAAACGCGTG GGGTATGCAG AATCCGCCCG AGGCTATTTC
GTAGACTCGT TCCGCGAGGC CCTGGACGGA TACGAGCGGG AAATCTCGGC TGACGACATG
GAATCCCGCT GGCAGGACAT GCCGGTAGGC GACCTGCTCC AAATCATTCG CGCCCAACGC
GCCATGAATC CCGATTATGA AGCCGACGGC TACGGAACCG TTCTGCCCCC GTGGCTGATC
TACAAAGAGC AGCTCGTCTG GAACACGCTG GTCTGCGCCG TCTACGGTCC GCACGTCGCC
CGCCCCCTGG CCGTCGAATC CGTGGACCTG TTAACGATGG ACGGCGGAAC CGTCCACGAG
GACATCATCA CAGACTTGGC CCGGTCCTCC TACGACGTGT ATCTTTCCGG CCAGACGGAG
CTGGGCGGCT CCCCCGAATT CAAAACCTAC GACGACCAAC CCGTCGACCT GCGCATGTCG
GGCATCCAGC GTATCCAGAG CATTCCCGAC ATGTTGAAGA TCCTGGGATA CCGAATCTCT
CCCATCGGCA CCTGCTACCC AGACCAGCGT GTGGACAGGC TCTCCCCCAG CGAGGTGGAA
TGTCTGGCGG TTCTGGAGCA CCGACGCTGG CTTGCAGAGC GAATTGCCGC CGGCTGGACA
CTGTCTCCGA CAAAGGACAC AGCCGCCAAG CAGTCGCCCT ACCTGGTTCC CTGGGAGGCG
CTGCCCGAGC GGGCCCGAGA CTGCAACCGA CGTCAGCTTC GCAACCTTCC CACCCTGCTC
GCCTCCCGAG GCCTGTGCAT CACCCGATAA
|
|---|
| Protein sequence | MTKRKPLPPT AADAAREALR AEERKRASAG NPLKPIEVLK TIIAAYQAYV FATEGASADN
GAVASDDRQG LARGTQSAVD RMLFNANYWL AAYEDRIVST FPDACDARAC LKSIAVWNSH
TLRLNTLDPE DVTATFGRFC PPFAVNNRRG ADGKNGGKGP VPEFRTCALE IAGYKPAEQA
ADIVRLVADV EAEARIYQTL EGGNPLDALF DILPAWCLQD RIPMVAGGWY DNADIMLLVV
SELDACFKRV GYAESARGYF VDSFREALDG YEREISADDM ESRWQDMPVG DLLQIIRAQR
AMNPDYEADG YGTVLPPWLI YKEQLVWNTL VCAVYGPHVA RPLAVESVDL LTMDGGTVHE
DIITDLARSS YDVYLSGQTE LGGSPEFKTY DDQPVDLRMS GIQRIQSIPD MLKILGYRIS
PIGTCYPDQR VDRLSPSEVE CLAVLEHRRW LAERIAAGWT LSPTKDTAAK QSPYLVPWEA
LPERARDCNR RQLRNLPTLL ASRGLCITR
|
|---|
| |