Gene Shel_08450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08450 
Symbol 
ID8394736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp982757 
End bp983131 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID644985605 
ProductLSU ribosomal protein L12P 
Protein accessionYP_003143246 
Protein GI257063574 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0838646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.398642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGA CCAATGAAGA GATCATCGAG GCATTGAAAG AGATGACCCT GCTCCAGGCT 
TCCGAACTCG TTAAGGCTAT CGAGGAGACC TTCGGCGTTT CCGCCGCTGC TCCCGCTGCC
GTTGCTGTCG CTCCCGCTGG CGACGCTCCT GCTGCTGCTG AGCAGACCGA GTTCGACGTC
ATCCTCGAGG GCTTCGGCGA CAACAAGATC GCCGTCATCA AGGCCGTCCG TGAGATCACG
GGCCTGGGCC TGAAGGAAGC CAAGGCTGCT GTCGAGTCTG CTCCTGCTCC CATCAAGGAG
AAGGTTGCCA AGGAAGAGGC CGAGGACCTC AAGGCCAAGC TCGAGGCTGC TGGCGCTGCT
GTCACCGTCA AGTAA
 
Protein sequence
MALTNEEIIE ALKEMTLLQA SELVKAIEET FGVSAAAPAA VAVAPAGDAP AAAEQTEFDV 
ILEGFGDNKI AVIKAVREIT GLGLKEAKAA VESAPAPIKE KVAKEEAEDL KAKLEAAGAA
VTVK