Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08320 |
Symbol | |
ID | 8394723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 961656 |
End bp | 963038 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985591 |
Product | site-specific recombinase XerD |
Protein accession | YP_003143236 |
Protein GI | 257063564 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.113738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC CCAAGCAGCG AGAGAACTAC GGAAACGGCA GCATCACGCC CGAACTCGAC AAGGACGGCA ACCAGAAGAA GAACCGCAAA GGCCAGCTCG TTTGGCGCGT GTGCCTCTCG TTCGGATACG AAACAGTCAT CGACGGGAAC GGCAACAAGA GGCGCAAGCG GAACAAGGTG CAGCGCATGT GCTACGGCTC GCTCGGCGAC GCTCGCAAGT TCTGCAAGCA GCTACAGGCC GAATACGAGA ACATCGACCA GCAGGCGGCT CAAGGCTCGT TCAGGTGGGC GTGCGACAAG TGGCTTTCGT GGATGCGGGC GAAAGGTGGC GCATCCCAGG CCGTCTTGAG GCAATACACC ACATGGCTCG GCTACATGTC AGACGTTCTC GGGGATAAGA AGCTGGTGGA GGTTAAGAAG TCGGACGTTG AGGCCGCAAT GGTTGCGGTG AAGACCTCCC GCGACCTCTC GAATACGACG ATGAACAAGA TGTTCGCTGT CACGAAAAGG CTGTTCGAGT ATTGCGTAGA CTCCGATTGG ATTACCCGCA ACCCATGCCG CAACATCGAA GCGCCCGCGA AAGACCGGGT AACGTCACGC CACAGCCTGA CCGACGAGGA AAGCGCCGTT CTCCGCAAAA GGCTCGACCT CGCAGAGGCC GACGCGATCA GCGGCTACCT CGAAAAAGAG AACAGGCAAT CCGACCACAA CAACCTGTTC GGCCGCTCGT GCGTGCGCGG CTTGTCGCAT ATAAGCGGCA TAATCGCTAT CCGAATCATG CTCGCAACGG GTATGCGCAG GGGGGAGGTT TGCGGCCTCA CGTGGGGCGC GGTCGATTTC GACAACAGCC AGATTTACGT CAGGCAATCG CTCACGGCCT CGGTGGAGGT GAAAGACCCC AAGACCTACT CCGGCAGGCG TTCGCTGTTC GTTGAGCAGA ACACCATGCG GCACCTCAAG GAGTGGAAGA CGTTCCAGGC GAAAGCCCTC CATATGGTCA TGCCGGACGG CACGGCGCTC ACGCAGACCG ACGAAACGCC CGTATGCTGC TCGGACGTGG GCGGGTGGCT CGACCCCACT AACCTTAGTC GTTGGTGGGG CGGCAACAAG AACAAGGGGC GCGAAGGCTT CCGCGACTCC CTGGGGTTCC CCGAACTCAA CATGCACGAG CTAAGGCACA CCCAGGCGAC GATGCTTCTC GGCAACGGCA TAGACGTTAA GAGCGTGCAG ACGCGACTCG GGCATTCCCG CGCATCGGTC ACGCTCGACC AGTACGCCCA CGCGATACCA GCCAACGACA AGGCCGCTGC CGACCTTATG GGCGAGATTA TGAACAAGAG CGTCCCCGAA ACGCCCGTCG TGCGGATAGG GGAGAGTGCC TAG
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Protein sequence | MAKPKQRENY GNGSITPELD KDGNQKKNRK GQLVWRVCLS FGYETVIDGN GNKRRKRNKV QRMCYGSLGD ARKFCKQLQA EYENIDQQAA QGSFRWACDK WLSWMRAKGG ASQAVLRQYT TWLGYMSDVL GDKKLVEVKK SDVEAAMVAV KTSRDLSNTT MNKMFAVTKR LFEYCVDSDW ITRNPCRNIE APAKDRVTSR HSLTDEESAV LRKRLDLAEA DAISGYLEKE NRQSDHNNLF GRSCVRGLSH ISGIIAIRIM LATGMRRGEV CGLTWGAVDF DNSQIYVRQS LTASVEVKDP KTYSGRRSLF VEQNTMRHLK EWKTFQAKAL HMVMPDGTAL TQTDETPVCC SDVGGWLDPT NLSRWWGGNK NKGREGFRDS LGFPELNMHE LRHTQATMLL GNGIDVKSVQ TRLGHSRASV TLDQYAHAIP ANDKAAADLM GEIMNKSVPE TPVVRIGESA
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