| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08150 |
|---|
| Symbol | |
|---|
| ID | 8394706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 945056 |
|---|
| End bp | 945721 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644985575 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003143220 |
|---|
| Protein GI | 257063548 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4509] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03064] sortase, SrtB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.447744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000316905 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGC GCGCTGCAGA CGTGCATGCC GACCCGGACA TGGATGCCGA CCCGAAAGAC
GAAGCGCGCC GCGACACCGC CCTGGAAGAG CGGCCCGAGG TGGATTGGGA CTACTGGCTT
GACGAGAATC CGCAGATTGT TGCATGGCTC ACTGTGCCTG GAACCGACAT AGACTGCCCC
GTGGTACAGG CTCCCGCCGA CAACCCCGAA TTCTATCTGC GCCACGATAT CTTCGGCACC
TGGAACTACG CAGGATGCCC CTATGTGGAT GCCTCTTGCC CGAAAGGCGT GGATTCTCCG
TGCGTGCTGA TCTACGGACA CAACCTAACG GGCGAGCCGG AAACCATGTT CGCCGATTTC
GCACAGTATG TGGATGAGGA TTACGCCCGC AAGCACGCGC GAATGGTCTT GCAGACGCAG
GATGAAACAA GGGAGCTAAC CGTGTGGGGT GCTGCAGTGG TGGAAGGGAC AAGCCCGCTT
AACCGCACGG CATTCGAAAG CGAAGCCGAC CTCACGGACT ACCGAGGGCT GCTGCTGTCC
CGCGCGAACA TGGTACTTGA CGGAGCGGCT TGGGACCGGG GCACGCTCTA CGTATTCTGC
ACCTGCTCAT ACAGCACTTA CCGCAACGAG CGGACCCTGG TGTTCGCAAC GGGGCCTCCG
GCATGA
|
|---|
| Protein sequence | MQQRAADVHA DPDMDADPKD EARRDTALEE RPEVDWDYWL DENPQIVAWL TVPGTDIDCP
VVQAPADNPE FYLRHDIFGT WNYAGCPYVD ASCPKGVDSP CVLIYGHNLT GEPETMFADF
AQYVDEDYAR KHARMVLQTQ DETRELTVWG AAVVEGTSPL NRTAFESEAD LTDYRGLLLS
RANMVLDGAA WDRGTLYVFC TCSYSTYRNE RTLVFATGPP A
|
|---|
| |