Gene Shel_08130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08130 
Symbol 
ID8394704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp943228 
End bp943980 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID644985573 
ProductSSU ribosomal protein S2P 
Protein accessionYP_003143218 
Protein GI257063546 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000058431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000192008 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCGAAAG TCAGCATCAA GAGCCTGCTC GAAGCAGGCG CACACTTCGG GCATCAGACC 
CGTCGTTGGA ACCCCAAGAT GAAGCCGTAC ATCTTCGGCA GCCGTGGGGA CATCTACATC
ATCGACCTCA AGCAGACCCT CATCGGACTC GACCAGGCGT ATTCCTTCGT CGCCGAGACC
GCTGCCAAGG GCGGCACCGT GCTGTTCGTC GGCACCAAGA AGCAGGCCCA GGAAGCCGTC
GCCACCCAGG CTGACCGCTG CGGCATGCCT TACGTCAACG CTCGTTGGCT CGGCGGCATG
CTCACCAACT TCGTCACCAT CCGCTCCCGC GTGAAGCGTA TGGAAGAGCT GGAAGCCATG
CAGGCCGACG GCCGCATGGA AGTCCTGCCC AAGAAGGAGC AGATCCTGCT GAACAAGGAG
CTCGCAAAGC TGCAGACCAA CCTCAACGGC ATCCGCAACA TGACCAAGCT CCCCGACGCC
GTCTTCGTCG TCGACACCAA CCGCGAGCAG CTGGCCATCC ATGAGGCCAA GCGCCTCGGC
ATCCCCGTGG TCGGCACCCT GGATACCAAC TGCGACCCCG ACGATGTCGA TTTCGGCATT
CCCGCCAACG ACGACGCCAT CCGTTCCGTC AACCTGCTCG CCACTTTCGT GGCCGACGCT
GTCATTGACG CAACCGGCGT TTCCGCTGTC GAGGAAGAGA TCATTGCTTC CGCCGAGGAG
GCCGAAGAGG CCGCCGCTCC TGCTGCTGAA TAA
 
Protein sequence
MAKVSIKSLL EAGAHFGHQT RRWNPKMKPY IFGSRGDIYI IDLKQTLIGL DQAYSFVAET 
AAKGGTVLFV GTKKQAQEAV ATQADRCGMP YVNARWLGGM LTNFVTIRSR VKRMEELEAM
QADGRMEVLP KKEQILLNKE LAKLQTNLNG IRNMTKLPDA VFVVDTNREQ LAIHEAKRLG
IPVVGTLDTN CDPDDVDFGI PANDDAIRSV NLLATFVADA VIDATGVSAV EEEIIASAEE
AEEAAAPAAE