| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08120 |
|---|
| Symbol | |
|---|
| ID | 8394703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 941854 |
|---|
| End bp | 942888 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644985572 |
|---|
| Product | L-threonine aldolase |
|---|
| Protein accession | YP_003143217 |
|---|
| Protein GI | 257063545 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000672977 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000548027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGGT ATAACAACGA TTACAGCTAT GGGGCGCATC CCCGGATACT AAGCGCGTTG
ACCAGCATCA ATGAGAACAG CTATGGCGGA TACGGCTTGG ACCCGTGGTG CGACATGGCT
GCGGACACCA TCCGCACGCA TTGCGACCGC AGCGATGCCG AAGTTCACTT CATCGTGGGC
GGAACCCAGG CGAACTTCAC CGTGATCGAT GCTGCGCTGC GTCCGCATCA GGCGGTCGTT
TGCGCCGATA GCGGCCATAT CAACGTGCAT GAAACAGGTG CGGTCGAGCA TACGGGTCAC
AAGATTCTGG GCCTGGCGAG TCCTGACGGC AAGATAACGG CTGATCAGAT CGCGTCGGTC
GGCGAAGACT ACCGGACGAG CCCCGTTTGG GAGCACGTGG TCCAGCCGAA GATGGTGTAC
TTGTCGTTCC CGACGGAATT CGGCACGGTC TACACCCTCG ACGAGCTTAC CGCCATTCGG
TCGGTCTGCG ACGAATACAT GATGTACCTA TATATCGATG GAGCCAGAAT GTCTTACGGC
CTCGCGTCGT CCGAAACCGA TGTGACGTTG CCCGACATAG CGCGCCTTGC CGATGCCTTC
TATATCGGCG GTACGAAGTG CGGCGCCTTG TTCGGCGAAG CCATCGTGCT GTGCCATGAC
GACCTGAAGC CGTATTTCCG TGCAGCCATC AAGCAGAACG CAGGGCTTCT GGCCAAAGGC
TGGCTGATGG GCATCCAGTT CGAGATCCTC TTCCGCAAAG GCTTGTATTT CGAACTCGGC
GAAAGAGCGG TGCGCTACGC GATGCGCATC CGCAAGGCGT TTGAAAACGC AGGAATTCCC
GCATACATCG AAAGCTCGAC GAACCAGCAG TTCGTGGTCG TCAGCGACGA AGTGGCCGAC
AAGCTGGCCA AGGATTTCGT GTATGAAGAC GAAGGTCGTG CGGACGAAGG ACACCGCATC
ATCCGCTTCT GCACAAGCTG GGCAACGACC GAAGAGGATG TGGATGTCCT GGTAAGGGCC
ATCCAGGGTC TTTAA
|
|---|
| Protein sequence | MIRYNNDYSY GAHPRILSAL TSINENSYGG YGLDPWCDMA ADTIRTHCDR SDAEVHFIVG
GTQANFTVID AALRPHQAVV CADSGHINVH ETGAVEHTGH KILGLASPDG KITADQIASV
GEDYRTSPVW EHVVQPKMVY LSFPTEFGTV YTLDELTAIR SVCDEYMMYL YIDGARMSYG
LASSETDVTL PDIARLADAF YIGGTKCGAL FGEAIVLCHD DLKPYFRAAI KQNAGLLAKG
WLMGIQFEIL FRKGLYFELG ERAVRYAMRI RKAFENAGIP AYIESSTNQQ FVVVSDEVAD
KLAKDFVYED EGRADEGHRI IRFCTSWATT EEDVDVLVRA IQGL
|
|---|
| |