| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08090 |
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| Symbol | |
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| ID | 8394700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 936928 |
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| End bp | 938355 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985569 |
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| Product | transcriptional regulator with HTH domain and aminotransferase domain |
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| Protein accession | YP_003143214 |
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| Protein GI | 257063542 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000657612 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTTTACC TTGATAGCAC TAGCAATGAA CCGTTTTATC AACAGCTCTA TCAGCAGATT
GTCGAAGGCA TCCACGATGG AACCTATCCC GAAGGGTCCC GCCTTCCCTC TATTCGAGCC
TGCGCCCGCG ACCTGCACGT GTCCACCAAC ACCATCGAAC AGGCCTATCG CCTTGCGGTT
CAGGAAGACC TGGTGCTGAC GAAACCGGGC AGCGGCTATT TCGTCAACAA GCAGCCGAAA
CGCGACCACG ACAGCTTTGT CTTCTCGAAA GAGTACCAAG CCGACATCGA ACGGCTTAAG
GCGATATGCG CACCGGCCAC CGAGGAGTCG GACGTACGAT ACGACTTCAG GTACGACAAC
CTGGAGCCTG ATTCGTTCCC CTATACCACA TGGGCCCGCG TGACCCGCAA CGTCCTTTTC
TCCAAACACG CCCCCAGTGC GGCCCGATAC AGCGACCCCC AAGGACTGTT CTCGCTGCGC
AAGCAAATCG CCCGTCATCT GGCCCATGAG GACAACACGC GCGCCATCCC AGAGCAGATC
ATCGTTCTCT CGAACACCCG CGCGATCATT AGCACCGTCG CATCGCTTTT CGACAGGACG
ACGACGGAAG TCTGCGTCGA AAACCCCGGA TTCAACGAGG TTCACGCAGG ATTTGCGAAC
CTGGGCATGA AGGTAAGCAG CTACCCAGCG TTCTCCCCCA CCAGCCTCAC GTTGCCCCAG
CCGAAAGACG GCAGGCAGCT GGTGCTGTTC ATCACGCCCT CGTGCCAGTT CCCCACCACA
GCCGTGCTCA ACACGGAGCA ACGGAAGCAG CTGCTCGCTT GGGCTGAAGA GACCGACTCA
TACGTGATTG TGGACACCTA CGGCCAGGAA TTTCAGGCAG GAATACGTCG CTCCCCGTCG
CTGCAGTCGA TGGATGCCAA CGGCCGCATC ATCACAATCG GCTCGTTTTC CCGCTCGCTT
TCGCCGTCCC TGTGCATTAG CTATGCCGTG CTGCCACCGA AACTCATGAT CGAATGGATC
GAGAAGAACA GGGGCTACCA CGCCCAGGTG CCTTGGCAGA CCCAAGCCGC CCTCTCTTCA
TATATGGCGA ACGGCTTCTG GCAGAACCAT CTGCAGAAAC TGCATTCGTC GTATTCGGAA
AAGCGCAAAC AGCTGGTCCG CTGCCTGCAA ACGTACATGG CCGGCAAGAT AGACGTCATG
GACGGAAACG CCGGTCTACA TGTGCTCGTC CGGACAAAGG ACGGTCGTTC GGCGGACGAG
CTTATCGCCA GCGCCGCCGA ATACGGCATC GCCGTGTATC CAACCGATAT ATACTGGGCA
GACGGCACGC CGCGCGGCTG GAACTTCGTT CTCGTCGGTT GTTCCGCCAT ACCGCTCGAA
AGCATCGAGC CAGGAATCCG TTTGCTGACA GAGGCCTGGT TCGGATAG
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| Protein sequence | MLYLDSTSNE PFYQQLYQQI VEGIHDGTYP EGSRLPSIRA CARDLHVSTN TIEQAYRLAV
QEDLVLTKPG SGYFVNKQPK RDHDSFVFSK EYQADIERLK AICAPATEES DVRYDFRYDN
LEPDSFPYTT WARVTRNVLF SKHAPSAARY SDPQGLFSLR KQIARHLAHE DNTRAIPEQI
IVLSNTRAII STVASLFDRT TTEVCVENPG FNEVHAGFAN LGMKVSSYPA FSPTSLTLPQ
PKDGRQLVLF ITPSCQFPTT AVLNTEQRKQ LLAWAEETDS YVIVDTYGQE FQAGIRRSPS
LQSMDANGRI ITIGSFSRSL SPSLCISYAV LPPKLMIEWI EKNRGYHAQV PWQTQAALSS
YMANGFWQNH LQKLHSSYSE KRKQLVRCLQ TYMAGKIDVM DGNAGLHVLV RTKDGRSADE
LIASAAEYGI AVYPTDIYWA DGTPRGWNFV LVGCSAIPLE SIEPGIRLLT EAWFG
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