Gene Shel_07980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07980 
Symbol 
ID8394689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp925339 
End bp926685 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content64% 
IMG OID644985558 
Productbiotin carboxylase /acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_003143203 
Protein GI257063531 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000504481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTCTCCA AGATCCTAGT AGCAAACCGC GGCGAGGTGG CGCTGCGCAT CATGCGCGCC 
GCCCGCGAGC TGGGCGTGAA GACGGTAGCC GTCTACTCCG AGGCCGACCG CGACACGCTG
CCCGTGAAAT ACGCCGACGA GGCCGTGTGC ATCGGTCCGG CTCCTGCCGG CAAGTCTTAC
CTGGTCATGG CGAACATCAT TGCCGCTGCC AACATCACTG GCTGCGAAGC CGTGCATCCC
GGCTATGGTT TCTTGGCTGA AAACGCCGAG TTCGCACGCG CCTGCGCCGA CAACGACCTG
GTCTTCATCG GCCCGTCTCC CGAATGCATC GAGCGCATGG GCGACAAGGC GTCGGCCCGT
GAGACCATGA CCAGTTACGG CGTTCCCACG GTTCCCGGTT CCGACGGCGT CGTCGACACT
GTTGAAGAGG CCCGTGCCTT CGCCGAAGAG GTGGGCTATC CCGTGCTCAT CAAGGCTTCC
GCCGGCGGCG GCGGCAAGGG CATGCGCGAA GTCCACGACC CCAAAGACCT TGAAAGCGCC
TATGCGGCCG CAAAGGCCGA GGCTCAGGCC GCGTTCGGCA ACGGCGACGT GTACCTGGAG
AAGTTGGTGC TGCGTCCCCG CCACGTCGAG GTGCAGGTCC TGGCTGACAA CTACGGTAAC
CGTGTGGCCC TGTGCGAGCG CGACTGCTCC ATCCAGCGCC GTCATCAGAA GCTGCTGGAA
GAAGCCCCTT CGCCGGCCCT GACCGACGAG ACCCGCCGCG CCATGGGTGT CGCGGCCATC
AAGGCTGTCC GCGCCGTGGA CTACCGCAAC GCCGGCACCA TCGAGTTTTT GCTGGACGAA
TCCGGCAAGT TCTACTTCAT GGAGATGAAC ACCCGCGTGC AGGTGGAGCA TCCGGTCACC
GAGCAGATCA CCGGCGTCGA CATCATCAAA GAGCAGCTGC GTATCGCCGC TGACGAGCCC
ATGAACTGCG CCGACCGCGC ACCCTTCTCG CCGAACGGCC ACGCCATCGA GTTCCGCATC
AACGCCGAGG ACCCGGACAA CGACTTCCGT CCCATCCCTG GCAAGATCAC CCGCCTCGAC
TTCCCGGGTG GCCCGGGCGT GCGTGTGGAA ACCTATCTGC AGGCCGGCTC TTCCATTTCG
CCGTACTACG ATTCGATGAT CGCCAAGCTC ATCGTGTGGG GCGAAAACCG TGAAGAGGCT
CTGCAGCGCG GCCGTCGCGC CCTTGCCGAG TTCAATATCG AGGGCATCCC GACCACCATT
CCGTTCCATC AGAAAGTGTT GGAAACGGAA ATCTTCCAAG CCGGCGAAGC GCGAACCGAC
TTCATCGAAA TCGCCTTCGA GCAGTAA
 
Protein sequence
MFSKILVANR GEVALRIMRA ARELGVKTVA VYSEADRDTL PVKYADEAVC IGPAPAGKSY 
LVMANIIAAA NITGCEAVHP GYGFLAENAE FARACADNDL VFIGPSPECI ERMGDKASAR
ETMTSYGVPT VPGSDGVVDT VEEARAFAEE VGYPVLIKAS AGGGGKGMRE VHDPKDLESA
YAAAKAEAQA AFGNGDVYLE KLVLRPRHVE VQVLADNYGN RVALCERDCS IQRRHQKLLE
EAPSPALTDE TRRAMGVAAI KAVRAVDYRN AGTIEFLLDE SGKFYFMEMN TRVQVEHPVT
EQITGVDIIK EQLRIAADEP MNCADRAPFS PNGHAIEFRI NAEDPDNDFR PIPGKITRLD
FPGGPGVRVE TYLQAGSSIS PYYDSMIAKL IVWGENREEA LQRGRRALAE FNIEGIPTTI
PFHQKVLETE IFQAGEARTD FIEIAFEQ