Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_07930 |
Symbol | |
ID | 8394684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 917872 |
End bp | 918510 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985553 |
Product | Fe-S-cluster-containing hydrogenase subunit |
Protein accession | YP_003143198 |
Protein GI | 257063526 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000707449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAGT ACGCCATTGT CGTTGACGAG CACCGTTGCA TCGGTTGCTG GTCCTGCAGC GTTGCCTGCA AACTCGAGAA CAACCTCCCC GATCAGTCCT GGTGGAACAC CGTGCTGACC GTGGGCGGCG ACAGTGTGAA CACTCCTGCC GGCGAATACG GCAAGAACAC CATCACCTTC AATCCGTACC ACTGCATGCA TTGCGACACC CCGGCCTGCA CCGCCGTGTG CCCGACCGGC GCCACCTACA AGGATGAGGA AACCGGCATC GTCATGCAGA ACGTGTCCGA GTGCATCGGC TGCCGCAGCT GCATCGAGGC TTGCCCCTAC ACGGGCGTCC GCACCTACCT GGAAGAGGAC CCCATTCCCG CCATGGAGTG GCCTGTCGGC AACCAGCAGG CACCCGACCA CCTGGTCAAC ACCGTCGAGA AGTGCATCAT GTGCTACTAC CGCGTGAAGG ACGGCAAGGA CCCCGCATGC GTCGAGGGCT GCCCCGCCTA CGCCCGCGTC TTCGGCGATT TGGACGACCC CGAAAGCGAA GTGTCCAAGC TTCTGGCCGA GCGCGAGTAC TACGTGCTCA ACCCCGAAGC CGGCACCGGC CCGAACGTGT ATTACCTTAA AGACACCACG CAGCGCTAA
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Protein sequence | MTKYAIVVDE HRCIGCWSCS VACKLENNLP DQSWWNTVLT VGGDSVNTPA GEYGKNTITF NPYHCMHCDT PACTAVCPTG ATYKDEETGI VMQNVSECIG CRSCIEACPY TGVRTYLEED PIPAMEWPVG NQQAPDHLVN TVEKCIMCYY RVKDGKDPAC VEGCPAYARV FGDLDDPESE VSKLLAEREY YVLNPEAGTG PNVYYLKDTT QR
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