Gene Shel_07920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07920 
Symbol 
ID8394683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp917142 
End bp917765 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content61% 
IMG OID644985552 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003143197 
Protein GI257063525 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000683605 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAAAA CCAACCTTGC CGCCATGTTC AAGCTCTTCT CCATCGCGTT GCAGCCGATC 
CGCGCCGATT GGATGGACCT GTTGACCGAA GGGAAGCTGC GCGACGACGT GCGCATGATA
TGGACGGCGC TGGAGCTTCC GCAAGCGCCT CTGGACGAGT TCTGCGCAAC GCTTGACACC
TTCGTCGGGC GCGATCCCGA AGAGGTCCTC CACGAGCTGC GCCAGGAGCG CACGCGCCTG
TTCATCGGCG ACAAACCGCT CGTCAAGAGT TCGGAGGGAC TGTGGCGCCG CGACCGCGAA
GGCAGGCGCG CCGTGCGCAT GATCAACCAG TACTCCATCG AGGTCCAGGA GTTCATGCGC
GAGTGCGGCG TGGCCAAGAA GGCCGGCACC AACGACTGCA TCGACTATCT GGAAACCGAA
TGCGATTTCT GCGCGTTTCT GGCGGACCGA CCCGAGTACC TCATCGAAAT GGGCAAGGAG
CCCATCGACC TGCTCGATCA GTTCATGGAC GAGCACGTGA AGAAATGGGG TCCGGGCCTG
TGCGAAGATG TGGTGCGGGA AACGCGCAAT CCGTATTTCC GCGCGGCATA CGGGCTCATG
GCCGAGTACC TCAAGGAATT CTAA
 
Protein sequence
MPKTNLAAMF KLFSIALQPI RADWMDLLTE GKLRDDVRMI WTALELPQAP LDEFCATLDT 
FVGRDPEEVL HELRQERTRL FIGDKPLVKS SEGLWRRDRE GRRAVRMINQ YSIEVQEFMR
ECGVAKKAGT NDCIDYLETE CDFCAFLADR PEYLIEMGKE PIDLLDQFMD EHVKKWGPGL
CEDVVRETRN PYFRAAYGLM AEYLKEF