Gene Shel_07890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07890 
Symbol 
ID8394680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp914183 
End bp914815 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID644985549 
Producthypothetical protein 
Protein accessionYP_003143194 
Protein GI257063522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00213285 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCATTTGT CAGCCATGGC GAAGCTGTGC TCGCTGCTTG CGCGTGTGTT CTCCTACCCC 
GACCGCATCG AGGCGCAGGC GTACACGTCC GTCGAGTTCC TCGATATCTG CGAAGGGTTC
GTATCCGAAG CCGGCTTTCC CGCCCGCATC GCCGACGACG TGTGCGAACG GTTCGCCGAG
ATGTCGAACC GGATGGATTC CGAGGAGCGA GGCAAGGCTC TGCGCGTGGA ATACACGCAG
CTGTTCACCC TGCCGCCGCG CCCGATTTCT TTGGTGGGCT CCAAATGGGT GCACAACCGC
ACGCTCGCTT CCGAACGCAA AGGCGAGCGC TTCGCCGTTG ATGAAGTGTA CCGCGAGCTG
GGGCTGCGCA ATAAACCAAC GGTGCGAGAC CCCGCCGATC ACCTGGTAAG CGAGCTCGAT
TTCATGCACT ACATCCTGCG TGCCGAAGCG CGGGCCTGGG ATAACGACGA CCTTGTGATG
GCGCGTGACT GGCGCCAGCT GCGCGACGAC TTTCTGGAAT ACCACCTTTA TGAGCTGGCC
TTGGGCGTGG CACACGCCAT AGACCGGATG TCCTCAAACG CGCACATGCG CTACTACGCC
GCGCTGCTCC GCCTGGTCAT TGAACATATA TAG
 
Protein sequence
MHLSAMAKLC SLLARVFSYP DRIEAQAYTS VEFLDICEGF VSEAGFPARI ADDVCERFAE 
MSNRMDSEER GKALRVEYTQ LFTLPPRPIS LVGSKWVHNR TLASERKGER FAVDEVYREL
GLRNKPTVRD PADHLVSELD FMHYILRAEA RAWDNDDLVM ARDWRQLRDD FLEYHLYELA
LGVAHAIDRM SSNAHMRYYA ALLRLVIEHI