Gene Shel_07710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07710 
Symbol 
ID8394662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand+ 
Start bp893207 
End bp893848 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID644985531 
Producturacil-DNA glycosylase, family 4 
Protein accessionYP_003143176 
Protein GI257063504 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.240792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC ATTACGACCA TTTCAAGACC ATCTCTCCGT TGGGTGACGA GACGTCCGAG 
CAGCTGCTGG GCATGATCGG CGATGCCGTG CGCGCATGTC GCAAGTGCTA CCTGTGCGAA 
GGGCGCACCA ACGCCGTTCC CGGGTTCGGC AACGCCGGCG CGCGCATCAT GCTGATCGGC 
GAGGCACCGG GCAAGAACGA GGACCTGCAG GGCAAGCCCT TCGTGGGCGC GGCCGGCAAC 
TACCTCACCG AGCTTCTGGG GTATGCGGGC CTCACGCGCG AAGAGGTATT CATCGCGAAC 
ATCCTGAAGT GCCGTCCGCC TTCGAACCGC AACCCGCAGC CCGACGAGAT CTTCGAGTGC 
ACGCCGTACC TGCGCGACCA GGTGCGCGCC ATCATGCCCG AATACATCGT GACCATGGGC 
AACTTCGCCA CGAAATTCAT CCTGCGCACG GACCGCGGCA TCACGGGCCT GCGCGGCAAC 
CTGCAAAAGA CCGGCCAGTT CAGCGTGCTG CCGGTGTTCC ATCCGGCGGC GGCCATCTAC 
GACCGCACGA AGCGCGAAGT GCTTGAAGCG GACTTCGTGT ATCTGGGCCG CCTTTTGGGC 
AATGTGCCGT GGGAAGGCGA CGCACCGAAC GACGGCCGAT AG
 
Protein sequence
MTIHYDHFKT ISPLGDETSE QLLGMIGDAV RACRKCYLCE GRTNAVPGFG NAGARIMLIG 
EAPGKNEDLQ GKPFVGAAGN YLTELLGYAG LTREEVFIAN ILKCRPPSNR NPQPDEIFEC 
TPYLRDQVRA IMPEYIVTMG NFATKFILRT DRGITGLRGN LQKTGQFSVL PVFHPAAAIY 
DRTKREVLEA DFVYLGRLLG NVPWEGDAPN DGR